Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNFT1Q5M7Z0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNFT1Q5M7Z0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.92■□□□□ 0.3
RNFT1Q5M7Z0 AC007952.6-201ENST00000573168 2673 ntBASIC16.92■□□□□ 0.3
RNFT1Q5M7Z0 AC003957.1-201ENST00000625108 2673 ntBASIC16.92■□□□□ 0.3
RNFT1Q5M7Z0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNFT1Q5M7Z0 FP475955.4-201ENST00000623131 1990 ntBASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 KRT18P23-201ENST00000435622 1283 ntBASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 AC011498.5-201ENST00000592027 486 ntBASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNFT1Q5M7Z0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 MIR564-202ENST00000385049 94 ntBASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 AC092119.3-201ENST00000612618 583 ntBASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 AC012313.10-201ENST00000623509 926 ntBASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 AL391807.1-203ENST00000604392 2365 ntBASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNFT1Q5M7Z0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.89■□□□□ 0.3
RNFT1Q5M7Z0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
RNFT1Q5M7Z0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.89■□□□□ 0.3
RNFT1Q5M7Z0 AL162741.1-201ENST00000565563 1558 ntBASIC16.89■□□□□ 0.3
RNFT1Q5M7Z0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RNFT1Q5M7Z0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
RNFT1Q5M7Z0 AC093484.2-201ENST00000580996 2166 ntBASIC16.89■□□□□ 0.3
RNFT1Q5M7Z0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 AL136038.4-201ENST00000603606 1261 ntBASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 AL032819.2-201ENST00000624543 2162 ntBASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 AC073130.3-201ENST00000624389 2278 ntBASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.89■□□□□ 0.29
RNFT1Q5M7Z0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms