Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
HERC4Q5GLZ8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 AC096733.2-201ENST00000609937 1394 ntBASIC20.97■□□□□ 0.95
HERC4Q5GLZ8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 MFAP1P1-201ENST00000442257 1255 ntBASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.96■□□□□ 0.95
HERC4Q5GLZ8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.95■□□□□ 0.95
HERC4Q5GLZ8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 CRYGFP-201ENST00000418459 633 ntBASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HERC4Q5GLZ8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms