Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
ALFQ53S48 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 AL109659.2-201ENST00000606809 1674 ntBASIC19.3■□□□□ 0.68
ALFQ53S48 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.3■□□□□ 0.68
ALFQ53S48 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.3■□□□□ 0.68
ALFQ53S48 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ALFQ53S48 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.3■□□□□ 0.68
ALFQ53S48 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.3■□□□□ 0.68
ALFQ53S48 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 TMPOP1-202ENST00000424642 1267 ntBASIC19.3■□□□□ 0.68
ALFQ53S48 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ALFQ53S48 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.3■□□□□ 0.68
ALFQ53S48 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.3■□□□□ 0.68
ALFQ53S48 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.3■□□□□ 0.68
ALFQ53S48 AC141257.4-201ENST00000634557 245 ntBASIC19.3■□□□□ 0.68
ALFQ53S48 AC136944.6-201ENST00000634818 245 ntBASIC19.3■□□□□ 0.68
ALFQ53S48 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.3■□□□□ 0.68
ALFQ53S48 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ALFQ53S48 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALFQ53S48 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
ALFQ53S48 HEIH-201ENST00000623091 1652 ntBASIC19.3■□□□□ 0.68
ALFQ53S48 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ALFQ53S48 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.29■□□□□ 0.68
ALFQ53S48 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.29■□□□□ 0.68
ALFQ53S48 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
ALFQ53S48 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.29■□□□□ 0.68
ALFQ53S48 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.29■□□□□ 0.68
ALFQ53S48 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ALFQ53S48 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
ALFQ53S48 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.29■□□□□ 0.68
ALFQ53S48 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ALFQ53S48 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.29■□□□□ 0.68
ALFQ53S48 MIR3180-5-201ENST00000583743 153 ntBASIC19.29■□□□□ 0.68
ALFQ53S48 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.29■□□□□ 0.68
ALFQ53S48 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.29■□□□□ 0.68
ALFQ53S48 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
ALFQ53S48 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALFQ53S48 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALFQ53S48 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.28■□□□□ 0.68
ALFQ53S48 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ALFQ53S48 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.28■□□□□ 0.68
ALFQ53S48 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALFQ53S48 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.28■□□□□ 0.68
ALFQ53S48 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.28■□□□□ 0.68
ALFQ53S48 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.28■□□□□ 0.68
ALFQ53S48 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.28■□□□□ 0.68
ALFQ53S48 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.28■□□□□ 0.68
ALFQ53S48 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALFQ53S48 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALFQ53S48 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
ALFQ53S48 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.28■□□□□ 0.68
ALFQ53S48 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
ALFQ53S48 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ALFQ53S48 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALFQ53S48 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.28■□□□□ 0.68
ALFQ53S48 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
ALFQ53S48 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.28■□□□□ 0.68
ALFQ53S48 AC009947.2-201ENST00000444014 672 ntBASIC19.28■□□□□ 0.68
ALFQ53S48 AC104076.2-201ENST00000448912 469 ntBASIC19.28■□□□□ 0.68
ALFQ53S48 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ALFQ53S48 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ALFQ53S48 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ALFQ53S48 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.28■□□□□ 0.68
ALFQ53S48 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.28■□□□□ 0.68
ALFQ53S48 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
ALFQ53S48 WWOX-216ENST00000569818 525 ntBASIC19.28■□□□□ 0.68
ALFQ53S48 AC006011.2-201ENST00000621313 1158 ntBASIC19.28■□□□□ 0.68
ALFQ53S48 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALFQ53S48 AC083906.6-201ENST00000641366 219 ntBASIC19.28■□□□□ 0.68
ALFQ53S48 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALFQ53S48 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALFQ53S48 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms