Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHRFAM7AQ494W8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 AC079598.2-202ENST00000546624 1451 ntBASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 TERF1P1-201ENST00000311003 1181 ntBASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 NTF6B-201ENST00000591913 560 ntBASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRFAM7AQ494W8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 REXO1L10P-201ENST00000615707 1290 ntBASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 KRT8P9-201ENST00000558927 1449 ntBASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRFAM7AQ494W8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 DUX4L26-201ENST00000489078 1255 ntBASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms