Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 KRT18P1-202ENST00000452408 1331 ntBASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.07■□□□□ 0.8
CTC1Q2NKJ3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 CHCHD2P8-201ENST00000429873 447 ntBASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 AC106795.1-205ENST00000512851 1056 ntBASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 AL732292.2-201ENST00000609649 430 ntBASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 AC004408.2-201ENST00000623613 2777 ntBASIC20.06■□□□□ 0.8
CTC1Q2NKJ3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 AL162741.1-201ENST00000565563 1558 ntBASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTC1Q2NKJ3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 AC093525.10-201ENST00000625130 1569 ntBASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms