Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
YBX1P67809 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
YBX1P67809 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.53
YBX1P67809 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
YBX1P67809 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.33■□□□□ 0.53
YBX1P67809 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
YBX1P67809 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
YBX1P67809 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.33■□□□□ 0.53
YBX1P67809 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
YBX1P67809 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
YBX1P67809 FEM1AP3-201ENST00000403722 1741 ntBASIC18.33■□□□□ 0.52
YBX1P67809 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.33■□□□□ 0.52
YBX1P67809 MMP23A-201ENST00000234610 1017 ntBASIC18.33■□□□□ 0.52
YBX1P67809 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.33■□□□□ 0.52
YBX1P67809 AC087499.1-201ENST00000418141 1075 ntBASIC18.33■□□□□ 0.52
YBX1P67809 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.33■□□□□ 0.52
YBX1P67809 AL390961.4-201ENST00000623958 2535 ntBASIC18.33■□□□□ 0.52
YBX1P67809 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.33■□□□□ 0.52
YBX1P67809 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
YBX1P67809 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
YBX1P67809 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.33■□□□□ 0.52
YBX1P67809 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
YBX1P67809 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
YBX1P67809 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
YBX1P67809 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.33■□□□□ 0.52
YBX1P67809 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.33■□□□□ 0.52
YBX1P67809 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.33■□□□□ 0.52
YBX1P67809 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.32■□□□□ 0.52
YBX1P67809 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.32■□□□□ 0.52
YBX1P67809 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.32■□□□□ 0.52
YBX1P67809 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.32■□□□□ 0.52
YBX1P67809 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.32■□□□□ 0.52
YBX1P67809 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.32■□□□□ 0.52
YBX1P67809 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.32■□□□□ 0.52
YBX1P67809 AC010947.1-201ENST00000623454 693 ntBASIC18.32■□□□□ 0.52
YBX1P67809 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.32■□□□□ 0.52
YBX1P67809 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.32■□□□□ 0.52
YBX1P67809 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.32■□□□□ 0.52
YBX1P67809 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.32■□□□□ 0.52
YBX1P67809 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YBX1P67809 AL512353.2-201ENST00000448759 1962 ntBASIC18.31■□□□□ 0.52
YBX1P67809 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
YBX1P67809 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
YBX1P67809 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.31■□□□□ 0.52
YBX1P67809 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.31■□□□□ 0.52
YBX1P67809 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
YBX1P67809 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.31■□□□□ 0.52
YBX1P67809 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 PRSS44-201ENST00000515154 1146 ntBASIC18.31■□□□□ 0.52
YBX1P67809 AP005242.2-201ENST00000580065 1175 ntBASIC18.31■□□□□ 0.52
YBX1P67809 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.31■□□□□ 0.52
YBX1P67809 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
YBX1P67809 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.31■□□□□ 0.52
YBX1P67809 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
YBX1P67809 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
YBX1P67809 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
YBX1P67809 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.3■□□□□ 0.52
YBX1P67809 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
YBX1P67809 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.3■□□□□ 0.52
YBX1P67809 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.3■□□□□ 0.52
YBX1P67809 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.3■□□□□ 0.52
YBX1P67809 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.3■□□□□ 0.52
YBX1P67809 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
YBX1P67809 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms