Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHB3P54753 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHB3P54753 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHB3P54753 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHB3P54753 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.62■□□□□ 0.73
EPHB3P54753 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EPHB3P54753 ATP5G2P1-201ENST00000433580 426 ntBASIC19.62■□□□□ 0.73
EPHB3P54753 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.62■□□□□ 0.73
EPHB3P54753 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
EPHB3P54753 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.62■□□□□ 0.73
EPHB3P54753 AC104390.1-201ENST00000555663 520 ntBASIC19.62■□□□□ 0.73
EPHB3P54753 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.62■□□□□ 0.73
EPHB3P54753 AL136038.4-201ENST00000603606 1261 ntBASIC19.62■□□□□ 0.73
EPHB3P54753 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.62■□□□□ 0.73
EPHB3P54753 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.62■□□□□ 0.73
EPHB3P54753 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.62■□□□□ 0.73
EPHB3P54753 AC079602.3-201ENST00000623931 403 ntBASIC19.62■□□□□ 0.73
EPHB3P54753 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHB3P54753 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.62■□□□□ 0.73
EPHB3P54753 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.62■□□□□ 0.73
EPHB3P54753 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
EPHB3P54753 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHB3P54753 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHB3P54753 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
EPHB3P54753 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
EPHB3P54753 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHB3P54753 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHB3P54753 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.61■□□□□ 0.73
EPHB3P54753 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.61■□□□□ 0.73
EPHB3P54753 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
EPHB3P54753 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
EPHB3P54753 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHB3P54753 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHB3P54753 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EPHB3P54753 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
EPHB3P54753 HLA-F-220ENST00000434407 884 ntBASIC19.61■□□□□ 0.73
EPHB3P54753 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.61■□□□□ 0.73
EPHB3P54753 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.61■□□□□ 0.73
EPHB3P54753 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.61■□□□□ 0.73
EPHB3P54753 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.61■□□□□ 0.73
EPHB3P54753 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHB3P54753 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
EPHB3P54753 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHB3P54753 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHB3P54753 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.61■□□□□ 0.73
EPHB3P54753 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHB3P54753 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EPHB3P54753 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
EPHB3P54753 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.61■□□□□ 0.73
EPHB3P54753 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EPHB3P54753 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB3P54753 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB3P54753 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
EPHB3P54753 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.6■□□□□ 0.73
EPHB3P54753 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
EPHB3P54753 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB3P54753 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB3P54753 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
EPHB3P54753 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB3P54753 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.6■□□□□ 0.73
EPHB3P54753 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB3P54753 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.6■□□□□ 0.73
EPHB3P54753 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB3P54753 AL391807.1-203ENST00000604392 2365 ntBASIC19.6■□□□□ 0.73
EPHB3P54753 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB3P54753 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
EPHB3P54753 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.6■□□□□ 0.73
EPHB3P54753 BX276092.5-203ENST00000456199 560 ntBASIC19.6■□□□□ 0.73
EPHB3P54753 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.6■□□□□ 0.73
EPHB3P54753 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.6■□□□□ 0.73
EPHB3P54753 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.6■□□□□ 0.73
EPHB3P54753 AC010240.3-201ENST00000607688 395 ntBASIC19.6■□□□□ 0.73
EPHB3P54753 AL121672.3-201ENST00000608644 468 ntBASIC19.6■□□□□ 0.73
EPHB3P54753 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB3P54753 AC034236.2-201ENST00000606662 1610 ntBASIC19.6■□□□□ 0.73
EPHB3P54753 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.6■□□□□ 0.73
EPHB3P54753 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB3P54753 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EPHB3P54753 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
EPHB3P54753 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB3P54753 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB3P54753 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
EPHB3P54753 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.59■□□□□ 0.73
EPHB3P54753 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB3P54753 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHB3P54753 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB3P54753 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
EPHB3P54753 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
EPHB3P54753 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
EPHB3P54753 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.59■□□□□ 0.73
EPHB3P54753 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHB3P54753 CLEC4GP1-201ENST00000596555 870 ntBASIC19.59■□□□□ 0.73
EPHB3P54753 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHB3P54753 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB3P54753 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB3P54753 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB3P54753 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB3P54753 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.59■□□□□ 0.73
EPHB3P54753 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EPHB3P54753 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms