Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATN1P54259 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.69■□□□□ 0.9
ATN1P54259 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATN1P54259 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.69■□□□□ 0.9
ATN1P54259 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATN1P54259 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATN1P54259 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATN1P54259 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATN1P54259 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.68■□□□□ 0.9
ATN1P54259 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATN1P54259 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATN1P54259 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATN1P54259 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.68■□□□□ 0.9
ATN1P54259 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATN1P54259 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
ATN1P54259 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.68■□□□□ 0.9
ATN1P54259 MINOS1P3-201ENST00000457048 203 ntBASIC20.68■□□□□ 0.9
ATN1P54259 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATN1P54259 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.68■□□□□ 0.9
ATN1P54259 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.68■□□□□ 0.9
ATN1P54259 PAX6-247ENST00000638965 979 ntTSL 5 BASIC20.68■□□□□ 0.9
ATN1P54259 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATN1P54259 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATN1P54259 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.68■□□□□ 0.9
ATN1P54259 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATN1P54259 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATN1P54259 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.68■□□□□ 0.9
ATN1P54259 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.68■□□□□ 0.9
ATN1P54259 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATN1P54259 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATN1P54259 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.67■□□□□ 0.9
ATN1P54259 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ATN1P54259 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.67■□□□□ 0.9
ATN1P54259 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.67■□□□□ 0.9
ATN1P54259 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.67■□□□□ 0.9
ATN1P54259 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 VENTXP7-201ENST00000475503 772 ntBASIC20.67■□□□□ 0.9
ATN1P54259 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.67■□□□□ 0.9
ATN1P54259 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.67■□□□□ 0.9
ATN1P54259 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.67■□□□□ 0.9
ATN1P54259 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.67■□□□□ 0.9
ATN1P54259 TERC-201ENST00000602385 541 ntBASIC20.67■□□□□ 0.9
ATN1P54259 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ATN1P54259 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 RCC2P3-201ENST00000418112 1537 ntBASIC20.67■□□□□ 0.9
ATN1P54259 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATN1P54259 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.66■□□□□ 0.9
ATN1P54259 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.66■□□□□ 0.9
ATN1P54259 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATN1P54259 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 IGHGP-201ENST00000390555 1178 ntBASIC20.66■□□□□ 0.9
ATN1P54259 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.66■□□□□ 0.9
ATN1P54259 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 AL390728.6-201ENST00000566446 1246 ntBASIC20.66■□□□□ 0.9
ATN1P54259 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ATN1P54259 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.66■□□□□ 0.9
ATN1P54259 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATN1P54259 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.66■□□□□ 0.9
ATN1P54259 AL162377.1-201ENST00000618844 1793 ntBASIC20.66■□□□□ 0.9
ATN1P54259 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.66■□□□□ 0.9
ATN1P54259 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATN1P54259 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATN1P54259 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATN1P54259 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATN1P54259 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATN1P54259 PMS2P7-201ENST00000506558 1336 ntBASIC20.65■□□□□ 0.9
ATN1P54259 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATN1P54259 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATN1P54259 FAM220CP-201ENST00000395253 831 ntBASIC20.65■□□□□ 0.9
ATN1P54259 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC20.65■□□□□ 0.9
ATN1P54259 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.65■□□□□ 0.9
ATN1P54259 KRT18P67-201ENST00000432816 1264 ntBASIC20.65■□□□□ 0.9
ATN1P54259 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATN1P54259 RN7SL606P-201ENST00000472779 293 ntBASIC20.65■□□□□ 0.9
ATN1P54259 AC009065.1-201ENST00000564055 1225 ntBASIC20.65■□□□□ 0.9
ATN1P54259 AC106730.1-201ENST00000566722 1090 ntBASIC20.65■□□□□ 0.9
ATN1P54259 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.65■□□□□ 0.9
ATN1P54259 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms