Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC25A1P53007 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC25A1P53007 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
SLC25A1P53007 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC25A1P53007 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC25A1P53007 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
SLC25A1P53007 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC25A1P53007 AL353807.1-201ENST00000427475 662 ntBASIC16.71■□□□□ 0.27
SLC25A1P53007 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.71■□□□□ 0.27
SLC25A1P53007 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC25A1P53007 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC25A1P53007 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SLC25A1P53007 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC25A1P53007 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC25A1P53007 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SLC25A1P53007 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SLC25A1P53007 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SLC25A1P53007 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC25A1P53007 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC25A1P53007 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SLC25A1P53007 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
SLC25A1P53007 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC25A1P53007 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
SLC25A1P53007 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.26
SLC25A1P53007 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC25A1P53007 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SLC25A1P53007 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 KRT8P45-201ENST00000414328 1447 ntBASIC16.7■□□□□ 0.26
SLC25A1P53007 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC25A1P53007 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC25A1P53007 NOC2LP2-201ENST00000407594 1944 ntBASIC16.7■□□□□ 0.26
SLC25A1P53007 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC25A1P53007 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SLC25A1P53007 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SLC25A1P53007 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC25A1P53007 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC25A1P53007 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC25A1P53007 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC25A1P53007 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 RPS2P4-201ENST00000476944 856 ntBASIC16.7■□□□□ 0.26
SLC25A1P53007 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC25A1P53007 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC25A1P53007 AC026271.3-201ENST00000571884 352 ntBASIC16.7■□□□□ 0.26
SLC25A1P53007 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC25A1P53007 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC25A1P53007 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC25A1P53007 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC25A1P53007 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC25A1P53007 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC25A1P53007 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
SLC25A1P53007 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SLC25A1P53007 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC25A1P53007 HTR7P1-201ENST00000538670 1336 ntBASIC16.7■□□□□ 0.26
SLC25A1P53007 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC25A1P53007 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC25A1P53007 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 AL357033.4-201ENST00000617703 1807 ntBASIC16.69■□□□□ 0.26
SLC25A1P53007 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC25A1P53007 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC25A1P53007 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC25A1P53007 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC25A1P53007 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.69■□□□□ 0.26
SLC25A1P53007 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC25A1P53007 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SLC25A1P53007 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SLC25A1P53007 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC25A1P53007 AC073648.6-201ENST00000641589 218 ntBASIC16.69■□□□□ 0.26
SLC25A1P53007 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC25A1P53007 AL499627.1-201ENST00000569373 2188 ntBASIC16.69■□□□□ 0.26
SLC25A1P53007 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 KRT16P1-201ENST00000399124 1418 ntBASIC16.69■□□□□ 0.26
SLC25A1P53007 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC25A1P53007 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC25A1P53007 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms