Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BRCA2P51587 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.01■□□□□ 0.95
BRCA2P51587 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BRCA2P51587 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BRCA2P51587 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21■□□□□ 0.95
BRCA2P51587 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BRCA2P51587 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
BRCA2P51587 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21■□□□□ 0.95
BRCA2P51587 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21■□□□□ 0.95
BRCA2P51587 AC079834.2-201ENST00000609776 1949 ntBASIC21■□□□□ 0.95
BRCA2P51587 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
BRCA2P51587 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21■□□□□ 0.95
BRCA2P51587 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BRCA2P51587 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
BRCA2P51587 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BRCA2P51587 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21■□□□□ 0.95
BRCA2P51587 HLA-J-202ENST00000469281 1241 ntBASIC21■□□□□ 0.95
BRCA2P51587 AC090616.6-201ENST00000582640 721 ntBASIC21■□□□□ 0.95
BRCA2P51587 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
BRCA2P51587 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BRCA2P51587 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21■□□□□ 0.95
BRCA2P51587 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21■□□□□ 0.95
BRCA2P51587 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21■□□□□ 0.95
BRCA2P51587 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BRCA2P51587 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21■□□□□ 0.95
BRCA2P51587 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
BRCA2P51587 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
BRCA2P51587 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.99■□□□□ 0.95
BRCA2P51587 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
BRCA2P51587 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BRCA2P51587 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRCA2P51587 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.99■□□□□ 0.95
BRCA2P51587 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.99■□□□□ 0.95
BRCA2P51587 MED15P5-201ENST00000423150 992 ntBASIC20.99■□□□□ 0.95
BRCA2P51587 AC096582.2-201ENST00000510860 516 ntBASIC20.99■□□□□ 0.95
BRCA2P51587 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
BRCA2P51587 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BRCA2P51587 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
BRCA2P51587 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
BRCA2P51587 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.99■□□□□ 0.95
BRCA2P51587 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
BRCA2P51587 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
BRCA2P51587 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRCA2P51587 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRCA2P51587 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
BRCA2P51587 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRCA2P51587 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
BRCA2P51587 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRCA2P51587 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BRCA2P51587 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRCA2P51587 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRCA2P51587 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.98■□□□□ 0.95
BRCA2P51587 AL023284.2-201ENST00000405850 579 ntBASIC20.98■□□□□ 0.95
BRCA2P51587 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.98■□□□□ 0.95
BRCA2P51587 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.98■□□□□ 0.95
BRCA2P51587 CYMP-203ENST00000474680 1263 ntBASIC20.98■□□□□ 0.95
BRCA2P51587 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.98■□□□□ 0.95
BRCA2P51587 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRCA2P51587 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.98■□□□□ 0.95
BRCA2P51587 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.98■□□□□ 0.95
BRCA2P51587 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRCA2P51587 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.98■□□□□ 0.95
BRCA2P51587 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.98■□□□□ 0.95
BRCA2P51587 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRCA2P51587 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.98■□□□□ 0.95
BRCA2P51587 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
BRCA2P51587 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.98■□□□□ 0.95
BRCA2P51587 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRCA2P51587 AC145285.3-201ENST00000564603 959 ntBASIC20.98■□□□□ 0.95
BRCA2P51587 MIR3180-5-201ENST00000583743 153 ntBASIC20.98■□□□□ 0.95
BRCA2P51587 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.98■□□□□ 0.95
BRCA2P51587 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRCA2P51587 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRCA2P51587 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
BRCA2P51587 AC012640.2-201ENST00000561606 901 ntBASIC20.97■□□□□ 0.95
BRCA2P51587 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.97■□□□□ 0.95
BRCA2P51587 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.97■□□□□ 0.95
BRCA2P51587 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRCA2P51587 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRCA2P51587 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
BRCA2P51587 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRCA2P51587 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
BRCA2P51587 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.97■□□□□ 0.95
BRCA2P51587 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRCA2P51587 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRCA2P51587 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRCA2P51587 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
BRCA2P51587 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
BRCA2P51587 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
BRCA2P51587 KRT18P23-201ENST00000435622 1283 ntBASIC20.97■□□□□ 0.95
BRCA2P51587 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
BRCA2P51587 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.97■□□□□ 0.95
BRCA2P51587 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.97■□□□□ 0.95
BRCA2P51587 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.96■□□□□ 0.95
BRCA2P51587 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRCA2P51587 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
BRCA2P51587 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRCA2P51587 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
BRCA2P51587 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRCA2P51587 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms