Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB28P51157 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB28P51157 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.14■□□□□ 0.49
RAB28P51157 KRT18P57-201ENST00000443599 1254 ntBASIC18.14■□□□□ 0.49
RAB28P51157 FAM210CP-201ENST00000445714 574 ntBASIC18.14■□□□□ 0.49
RAB28P51157 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB28P51157 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
RAB28P51157 AC141257.4-201ENST00000634557 245 ntBASIC18.14■□□□□ 0.49
RAB28P51157 AC136944.6-201ENST00000634818 245 ntBASIC18.14■□□□□ 0.49
RAB28P51157 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.14■□□□□ 0.49
RAB28P51157 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB28P51157 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB28P51157 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB28P51157 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB28P51157 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
RAB28P51157 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB28P51157 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB28P51157 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB28P51157 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RAB28P51157 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB28P51157 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB28P51157 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB28P51157 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB28P51157 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB28P51157 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB28P51157 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RAB28P51157 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB28P51157 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
RAB28P51157 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.13■□□□□ 0.49
RAB28P51157 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.13■□□□□ 0.49
RAB28P51157 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RAB28P51157 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB28P51157 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
RAB28P51157 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB28P51157 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB28P51157 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB28P51157 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.13■□□□□ 0.49
RAB28P51157 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB28P51157 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RAB28P51157 BX323043.1-201ENST00000641006 1765 ntBASIC18.12■□□□□ 0.49
RAB28P51157 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.12■□□□□ 0.49
RAB28P51157 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 AP000523.1-201ENST00000398242 1049 ntBASIC18.12■□□□□ 0.49
RAB28P51157 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.12■□□□□ 0.49
RAB28P51157 BX664615.1-201ENST00000443558 458 ntBASIC18.12■□□□□ 0.49
RAB28P51157 AC009947.2-201ENST00000444014 672 ntBASIC18.12■□□□□ 0.49
RAB28P51157 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.12■□□□□ 0.49
RAB28P51157 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RAB28P51157 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
RAB28P51157 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
RAB28P51157 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.12■□□□□ 0.49
RAB28P51157 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 RN7SL850P-201ENST00000579959 291 ntBASIC18.12■□□□□ 0.49
RAB28P51157 NEK4P2-201ENST00000580004 1012 ntBASIC18.12■□□□□ 0.49
RAB28P51157 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB28P51157 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB28P51157 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 MTMR9LP-203ENST00000426597 1545 ntBASIC18.12■□□□□ 0.49
RAB28P51157 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB28P51157 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.12■□□□□ 0.49
RAB28P51157 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB28P51157 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB28P51157 AC018445.3-201ENST00000624177 1945 ntBASIC18.11■□□□□ 0.49
RAB28P51157 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB28P51157 AP000974.1-201ENST00000623909 2387 ntBASIC18.11■□□□□ 0.49
RAB28P51157 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB28P51157 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.11■□□□□ 0.49
RAB28P51157 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB28P51157 MIR564-202ENST00000385049 94 ntBASIC18.11■□□□□ 0.49
RAB28P51157 KRT18P21-201ENST00000515767 1272 ntBASIC18.11■□□□□ 0.49
RAB28P51157 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB28P51157 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB28P51157 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.11■□□□□ 0.49
RAB28P51157 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB28P51157 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB28P51157 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB28P51157 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB28P51157 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB28P51157 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB28P51157 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RAB28P51157 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
RAB28P51157 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB28P51157 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
RAB28P51157 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB28P51157 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.11■□□□□ 0.49
RAB28P51157 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB28P51157 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB28P51157 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RAB28P51157 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms