Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CENPFP49454 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.18■□□□□ 0.98
CENPFP49454 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.18■□□□□ 0.98
CENPFP49454 AL390719.2-201ENST00000606993 987 ntBASIC21.18■□□□□ 0.98
CENPFP49454 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CENPFP49454 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.18■□□□□ 0.98
CENPFP49454 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.18■□□□□ 0.98
CENPFP49454 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CENPFP49454 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CENPFP49454 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.17■□□□□ 0.98
CENPFP49454 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.17■□□□□ 0.98
CENPFP49454 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CENPFP49454 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CENPFP49454 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CENPFP49454 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.17■□□□□ 0.98
CENPFP49454 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.17■□□□□ 0.98
CENPFP49454 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CENPFP49454 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CENPFP49454 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CENPFP49454 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.17■□□□□ 0.98
CENPFP49454 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.17■□□□□ 0.98
CENPFP49454 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CENPFP49454 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CENPFP49454 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CENPFP49454 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.17■□□□□ 0.98
CENPFP49454 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CENPFP49454 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.17■□□□□ 0.98
CENPFP49454 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.17■□□□□ 0.98
CENPFP49454 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.17■□□□□ 0.98
CENPFP49454 AC027601.4-201ENST00000611259 610 ntBASIC21.17■□□□□ 0.98
CENPFP49454 AC112497.1-201ENST00000624824 639 ntBASIC21.17■□□□□ 0.98
CENPFP49454 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CENPFP49454 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CENPFP49454 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CENPFP49454 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.17■□□□□ 0.98
CENPFP49454 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.16■□□□□ 0.98
CENPFP49454 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CENPFP49454 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.16■□□□□ 0.98
CENPFP49454 AF186996.4-201ENST00000467186 377 ntBASIC21.16■□□□□ 0.98
CENPFP49454 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.16■□□□□ 0.98
CENPFP49454 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.16■□□□□ 0.98
CENPFP49454 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CENPFP49454 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CENPFP49454 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CENPFP49454 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CENPFP49454 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CENPFP49454 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CENPFP49454 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CENPFP49454 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.16■□□□□ 0.98
CENPFP49454 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CENPFP49454 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.16■□□□□ 0.98
CENPFP49454 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CENPFP49454 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CENPFP49454 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CENPFP49454 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CENPFP49454 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CENPFP49454 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CENPFP49454 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CENPFP49454 MIR3197-201ENST00000582241 73 ntBASIC21.16■□□□□ 0.98
CENPFP49454 AC090616.6-201ENST00000582640 721 ntBASIC21.16■□□□□ 0.98
CENPFP49454 AC005332.3-201ENST00000589904 676 ntBASIC21.16■□□□□ 0.98
CENPFP49454 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.15■□□□□ 0.98
CENPFP49454 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CENPFP49454 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.15■□□□□ 0.98
CENPFP49454 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CENPFP49454 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.15■□□□□ 0.98
CENPFP49454 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.15■□□□□ 0.98
CENPFP49454 DNAJB3-202ENST00000449667 1266 ntBASIC21.15■□□□□ 0.98
CENPFP49454 MIR3180-5-201ENST00000583743 153 ntBASIC21.15■□□□□ 0.98
CENPFP49454 AC116407.3-201ENST00000623905 1129 ntBASIC21.15■□□□□ 0.98
CENPFP49454 AC134684.3-201ENST00000641758 218 ntBASIC21.15■□□□□ 0.98
CENPFP49454 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.15■□□□□ 0.98
CENPFP49454 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CENPFP49454 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CENPFP49454 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CENPFP49454 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CENPFP49454 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CENPFP49454 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CENPFP49454 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CENPFP49454 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.15■□□□□ 0.98
CENPFP49454 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.15■□□□□ 0.98
CENPFP49454 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CENPFP49454 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CENPFP49454 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.15■□□□□ 0.98
CENPFP49454 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CENPFP49454 AL023284.2-201ENST00000405850 579 ntBASIC21.14■□□□□ 0.98
CENPFP49454 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.98
CENPFP49454 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CENPFP49454 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
CENPFP49454 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.14■□□□□ 0.97
CENPFP49454 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.14■□□□□ 0.97
CENPFP49454 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.14■□□□□ 0.97
CENPFP49454 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.14■□□□□ 0.97
CENPFP49454 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
CENPFP49454 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CENPFP49454 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CENPFP49454 UPF3AP3-201ENST00000420996 769 ntBASIC21.14■□□□□ 0.97
CENPFP49454 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CENPFP49454 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.14■□□□□ 0.97
CENPFP49454 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms