Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LTBRP36941 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LTBRP36941 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.41■□□□□ 0.7
LTBRP36941 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LTBRP36941 AL139424.1-201ENST00000607572 797 ntBASIC19.41■□□□□ 0.7
LTBRP36941 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.41■□□□□ 0.7
LTBRP36941 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.41■□□□□ 0.7
LTBRP36941 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.41■□□□□ 0.7
LTBRP36941 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.41■□□□□ 0.7
LTBRP36941 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LTBRP36941 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LTBRP36941 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
LTBRP36941 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.41■□□□□ 0.7
LTBRP36941 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LTBRP36941 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LTBRP36941 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LTBRP36941 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LTBRP36941 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LTBRP36941 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LTBRP36941 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LTBRP36941 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.4■□□□□ 0.7
LTBRP36941 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.4■□□□□ 0.7
LTBRP36941 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LTBRP36941 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LTBRP36941 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LTBRP36941 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.4■□□□□ 0.7
LTBRP36941 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.4■□□□□ 0.7
LTBRP36941 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.4■□□□□ 0.7
LTBRP36941 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.4■□□□□ 0.7
LTBRP36941 AC114341.1-201ENST00000618070 349 ntBASIC19.4■□□□□ 0.7
LTBRP36941 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LTBRP36941 AC006333.2-201ENST00000607957 2099 ntBASIC19.4■□□□□ 0.7
LTBRP36941 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.4■□□□□ 0.7
LTBRP36941 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LTBRP36941 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LTBRP36941 KRT89P-201ENST00000620027 1478 ntBASIC19.4■□□□□ 0.7
LTBRP36941 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LTBRP36941 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
LTBRP36941 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTBRP36941 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTBRP36941 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.39■□□□□ 0.69
LTBRP36941 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LTBRP36941 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.39■□□□□ 0.69
LTBRP36941 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.39■□□□□ 0.69
LTBRP36941 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.39■□□□□ 0.69
LTBRP36941 AL355877.3-201ENST00000622820 899 ntBASIC19.39■□□□□ 0.69
LTBRP36941 AC022898.2-201ENST00000616822 1312 ntBASIC19.39■□□□□ 0.69
LTBRP36941 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTBRP36941 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LTBRP36941 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LTBRP36941 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.39■□□□□ 0.69
LTBRP36941 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LTBRP36941 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.39■□□□□ 0.69
LTBRP36941 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LTBRP36941 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LTBRP36941 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LTBRP36941 LINC00565-201ENST00000562710 2331 ntBASIC19.39■□□□□ 0.69
LTBRP36941 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTBRP36941 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTBRP36941 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTBRP36941 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LTBRP36941 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.38■□□□□ 0.69
LTBRP36941 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.38■□□□□ 0.69
LTBRP36941 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LTBRP36941 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
LTBRP36941 FGFR3P6-201ENST00000457012 610 ntBASIC19.38■□□□□ 0.69
LTBRP36941 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.38■□□□□ 0.69
LTBRP36941 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LTBRP36941 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.38■□□□□ 0.69
LTBRP36941 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.38■□□□□ 0.69
LTBRP36941 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.38■□□□□ 0.69
LTBRP36941 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LTBRP36941 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.38■□□□□ 0.69
LTBRP36941 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LTBRP36941 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.37■□□□□ 0.69
LTBRP36941 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LTBRP36941 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.37■□□□□ 0.69
LTBRP36941 AC034236.2-201ENST00000606662 1610 ntBASIC19.37■□□□□ 0.69
LTBRP36941 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LTBRP36941 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTBRP36941 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LTBRP36941 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTBRP36941 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTBRP36941 PMS2P2-201ENST00000425039 1128 ntBASIC19.37■□□□□ 0.69
LTBRP36941 SCARNA2-201ENST00000458748 420 ntBASIC19.37■□□□□ 0.69
LTBRP36941 AC096582.2-201ENST00000510860 516 ntBASIC19.37■□□□□ 0.69
LTBRP36941 AC145285.3-201ENST00000564603 959 ntBASIC19.37■□□□□ 0.69
LTBRP36941 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.37■□□□□ 0.69
LTBRP36941 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LTBRP36941 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LTBRP36941 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTBRP36941 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LTBRP36941 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.36■□□□□ 0.69
LTBRP36941 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LTBRP36941 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LTBRP36941 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.36■□□□□ 0.69
LTBRP36941 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.36■□□□□ 0.69
LTBRP36941 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.36■□□□□ 0.69
LTBRP36941 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LTBRP36941 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms