Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ERCC3P19447 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ERCC3P19447 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ERCC3P19447 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.72■■□□□ 1.07
ERCC3P19447 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.72■■□□□ 1.07
ERCC3P19447 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
ERCC3P19447 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ERCC3P19447 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.72■■□□□ 1.07
ERCC3P19447 AC012313.10-201ENST00000623509 926 ntBASIC21.72■■□□□ 1.07
ERCC3P19447 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.72■■□□□ 1.07
ERCC3P19447 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ERCC3P19447 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ERCC3P19447 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.72■■□□□ 1.07
ERCC3P19447 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ERCC3P19447 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.71■■□□□ 1.07
ERCC3P19447 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.71■■□□□ 1.07
ERCC3P19447 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
ERCC3P19447 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.71■■□□□ 1.07
ERCC3P19447 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.71■■□□□ 1.07
ERCC3P19447 AL023284.2-201ENST00000405850 579 ntBASIC21.71■■□□□ 1.07
ERCC3P19447 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.71■■□□□ 1.07
ERCC3P19447 AC024243.1-201ENST00000609234 778 ntBASIC21.71■■□□□ 1.07
ERCC3P19447 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.71■■□□□ 1.07
ERCC3P19447 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.71■■□□□ 1.07
ERCC3P19447 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.71■■□□□ 1.07
ERCC3P19447 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ERCC3P19447 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.71■■□□□ 1.07
ERCC3P19447 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.7■■□□□ 1.07
ERCC3P19447 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
ERCC3P19447 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ERCC3P19447 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ERCC3P19447 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
ERCC3P19447 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.7■■□□□ 1.06
ERCC3P19447 AC036111.1-201ENST00000533973 1582 ntBASIC21.7■■□□□ 1.06
ERCC3P19447 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.7■■□□□ 1.06
ERCC3P19447 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ERCC3P19447 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.7■■□□□ 1.06
ERCC3P19447 AC087289.5-201ENST00000586076 3175 ntBASIC21.7■■□□□ 1.06
ERCC3P19447 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
ERCC3P19447 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ERCC3P19447 AL645929.1-201ENST00000420084 975 ntBASIC21.7■■□□□ 1.06
ERCC3P19447 AC034232.1-201ENST00000506026 1064 ntBASIC21.7■■□□□ 1.06
ERCC3P19447 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.7■■□□□ 1.06
ERCC3P19447 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ERCC3P19447 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.7■■□□□ 1.06
ERCC3P19447 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.7■■□□□ 1.06
ERCC3P19447 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ERCC3P19447 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ERCC3P19447 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
ERCC3P19447 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
ERCC3P19447 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ERCC3P19447 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ERCC3P19447 AIRN-201ENST00000601203 4374 ntBASIC21.69■■□□□ 1.06
ERCC3P19447 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ERCC3P19447 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ERCC3P19447 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERCC3P19447 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.69■■□□□ 1.06
ERCC3P19447 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.69■■□□□ 1.06
ERCC3P19447 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
ERCC3P19447 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ERCC3P19447 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERCC3P19447 NPAP1P7-201ENST00000613027 823 ntBASIC21.69■■□□□ 1.06
ERCC3P19447 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.69■■□□□ 1.06
ERCC3P19447 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERCC3P19447 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ERCC3P19447 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.69■■□□□ 1.06
ERCC3P19447 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
ERCC3P19447 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERCC3P19447 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.68■■□□□ 1.06
ERCC3P19447 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERCC3P19447 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERCC3P19447 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERCC3P19447 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERCC3P19447 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERCC3P19447 AC026396.1-201ENST00000419388 421 ntBASIC21.68■■□□□ 1.06
ERCC3P19447 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERCC3P19447 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ERCC3P19447 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.68■■□□□ 1.06
ERCC3P19447 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ERCC3P19447 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.68■■□□□ 1.06
ERCC3P19447 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ERCC3P19447 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.68■■□□□ 1.06
ERCC3P19447 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ERCC3P19447 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERCC3P19447 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ERCC3P19447 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms