Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A2P13942 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.98■■□□□ 1.27
COL11A2P13942 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A2P13942 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A2P13942 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.98■■□□□ 1.27
COL11A2P13942 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.98■■□□□ 1.27
COL11A2P13942 AC117500.6-201ENST00000624871 588 ntBASIC22.98■■□□□ 1.27
COL11A2P13942 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A2P13942 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.98■■□□□ 1.27
COL11A2P13942 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL11A2P13942 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
COL11A2P13942 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
COL11A2P13942 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 FAM197Y8-203ENST00000450145 560 ntBASIC22.97■■□□□ 1.27
COL11A2P13942 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 AC073648.2-201ENST00000510116 352 ntBASIC22.97■■□□□ 1.27
COL11A2P13942 GUSBP12-201ENST00000513727 720 ntBASIC22.97■■□□□ 1.27
COL11A2P13942 MOK-208ENST00000519058 917 ntTSL 2 BASIC22.97■■□□□ 1.27
COL11A2P13942 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC22.97■■□□□ 1.27
COL11A2P13942 AC092865.5-201ENST00000545435 363 ntBASIC22.97■■□□□ 1.27
COL11A2P13942 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 RPL18-209ENST00000550645 463 ntTSL 5 BASIC22.97■■□□□ 1.27
COL11A2P13942 RPL18-214ENST00000552588 559 ntTSL 3 BASIC22.97■■□□□ 1.27
COL11A2P13942 AL049840.3-201ENST00000602669 611 ntBASIC22.97■■□□□ 1.27
COL11A2P13942 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL11A2P13942 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.97■■□□□ 1.27
COL11A2P13942 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
COL11A2P13942 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.96■■□□□ 1.27
COL11A2P13942 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.96■■□□□ 1.27
COL11A2P13942 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL11A2P13942 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL11A2P13942 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL11A2P13942 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL11A2P13942 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC22.96■■□□□ 1.27
COL11A2P13942 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
COL11A2P13942 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC22.96■■□□□ 1.27
COL11A2P13942 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
COL11A2P13942 IGHV3-41-201ENST00000613121 348 ntBASIC22.96■■□□□ 1.27
COL11A2P13942 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL11A2P13942 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.96■■□□□ 1.27
COL11A2P13942 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
COL11A2P13942 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
COL11A2P13942 AL353692.3-201ENST00000407031 1396 ntBASIC22.95■■□□□ 1.26
COL11A2P13942 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
COL11A2P13942 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL11A2P13942 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL11A2P13942 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
COL11A2P13942 MIR1233-2-201ENST00000408138 82 ntBASIC22.95■■□□□ 1.26
COL11A2P13942 MIR1233-1-201ENST00000408722 82 ntBASIC22.95■■□□□ 1.26
COL11A2P13942 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC22.95■■□□□ 1.26
COL11A2P13942 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC22.95■■□□□ 1.26
COL11A2P13942 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC22.95■■□□□ 1.26
COL11A2P13942 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC22.95■■□□□ 1.26
COL11A2P13942 MIR3180-4-201ENST00000582223 153 ntBASIC22.95■■□□□ 1.26
COL11A2P13942 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL11A2P13942 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL11A2P13942 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.95■■□□□ 1.26
COL11A2P13942 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC22.95■■□□□ 1.26
COL11A2P13942 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL11A2P13942 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL11A2P13942 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC22.94■■□□□ 1.26
COL11A2P13942 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.94■■□□□ 1.26
COL11A2P13942 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.94■■□□□ 1.26
COL11A2P13942 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL11A2P13942 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC22.94■■□□□ 1.26
COL11A2P13942 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL11A2P13942 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL11A2P13942 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL11A2P13942 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.94■■□□□ 1.26
COL11A2P13942 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.94■■□□□ 1.26
COL11A2P13942 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC22.94■■□□□ 1.26
COL11A2P13942 PAM16-208ENST00000573553 722 ntTSL 2 BASIC22.94■■□□□ 1.26
COL11A2P13942 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC22.94■■□□□ 1.26
COL11A2P13942 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.94■■□□□ 1.26
COL11A2P13942 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC22.94■■□□□ 1.26
COL11A2P13942 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC22.94■■□□□ 1.26
COL11A2P13942 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL11A2P13942 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.93■■□□□ 1.26
COL11A2P13942 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL11A2P13942 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
COL11A2P13942 KRT8P32-201ENST00000512863 1461 ntBASIC22.93■■□□□ 1.26
COL11A2P13942 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
COL11A2P13942 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.93■■□□□ 1.26
COL11A2P13942 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC22.93■■□□□ 1.26
COL11A2P13942 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.93■■□□□ 1.26
COL11A2P13942 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COL11A2P13942 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.93■■□□□ 1.26
COL11A2P13942 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms