Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC24.89■■□□□ 1.58
CSB-PGBD3P0DP91 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CSB-PGBD3P0DP91 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CSB-PGBD3P0DP91 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.89■■□□□ 1.57
CSB-PGBD3P0DP91 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
CSB-PGBD3P0DP91 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CSB-PGBD3P0DP91 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CSB-PGBD3P0DP91 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CSB-PGBD3P0DP91 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CSB-PGBD3P0DP91 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
CSB-PGBD3P0DP91 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CSB-PGBD3P0DP91 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CSB-PGBD3P0DP91 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC24.87■■□□□ 1.57
CSB-PGBD3P0DP91 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC24.87■■□□□ 1.57
CSB-PGBD3P0DP91 PBK-203ENST00000522944 1499 ntTSL 2 BASIC24.87■■□□□ 1.57
CSB-PGBD3P0DP91 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CSB-PGBD3P0DP91 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 MIR564-202ENST00000385049 94 ntBASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 GPR32P1-201ENST00000601788 811 ntBASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CSB-PGBD3P0DP91 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 AC120114.3-201ENST00000611923 658 ntBASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 AC124864.1-201ENST00000623408 392 ntBASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.84■■□□□ 1.57
CSB-PGBD3P0DP91 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC24.83■■□□□ 1.57
CSB-PGBD3P0DP91 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CSB-PGBD3P0DP91 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC24.83■■□□□ 1.57
CSB-PGBD3P0DP91 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC24.83■■□□□ 1.57
CSB-PGBD3P0DP91 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CSB-PGBD3P0DP91 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CSB-PGBD3P0DP91 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC24.83■■□□□ 1.57
CSB-PGBD3P0DP91 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC24.83■■□□□ 1.57
CSB-PGBD3P0DP91 AL592071.1-201ENST00000611956 408 ntBASIC24.83■■□□□ 1.57
CSB-PGBD3P0DP91 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CSB-PGBD3P0DP91 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CSB-PGBD3P0DP91 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms