Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SP9P0CG40 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP9P0CG40 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.5■□□□□ 0.55
SP9P0CG40 MTDHP3-201ENST00000594186 672 ntBASIC18.5■□□□□ 0.55
SP9P0CG40 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.5■□□□□ 0.55
SP9P0CG40 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SP9P0CG40 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SP9P0CG40 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP9P0CG40 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP9P0CG40 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP9P0CG40 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP9P0CG40 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP9P0CG40 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP9P0CG40 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP9P0CG40 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SP9P0CG40 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP9P0CG40 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SP9P0CG40 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.49■□□□□ 0.55
SP9P0CG40 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.49■□□□□ 0.55
SP9P0CG40 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SP9P0CG40 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SP9P0CG40 AC020907.5-201ENST00000624372 1936 ntBASIC18.49■□□□□ 0.55
SP9P0CG40 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP9P0CG40 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.49■□□□□ 0.55
SP9P0CG40 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP9P0CG40 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP9P0CG40 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.49■□□□□ 0.55
SP9P0CG40 YBX2P1-201ENST00000394192 760 ntBASIC18.49■□□□□ 0.55
SP9P0CG40 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.49■□□□□ 0.55
SP9P0CG40 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SP9P0CG40 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.49■□□□□ 0.55
SP9P0CG40 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.49■□□□□ 0.55
SP9P0CG40 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.49■□□□□ 0.55
SP9P0CG40 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP9P0CG40 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SP9P0CG40 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP9P0CG40 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.49■□□□□ 0.55
SP9P0CG40 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.49■□□□□ 0.55
SP9P0CG40 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SP9P0CG40 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP9P0CG40 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP9P0CG40 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP9P0CG40 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.49■□□□□ 0.55
SP9P0CG40 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SP9P0CG40 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SP9P0CG40 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
SP9P0CG40 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 AL512353.2-201ENST00000448759 1962 ntBASIC18.48■□□□□ 0.55
SP9P0CG40 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 KRT89P-201ENST00000620027 1478 ntBASIC18.48■□□□□ 0.55
SP9P0CG40 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SP9P0CG40 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
SP9P0CG40 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.48■□□□□ 0.55
SP9P0CG40 RBM17P3-201ENST00000417687 1192 ntBASIC18.48■□□□□ 0.55
SP9P0CG40 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 DNAJB3-201ENST00000446806 729 ntBASIC18.48■□□□□ 0.55
SP9P0CG40 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.48■□□□□ 0.55
SP9P0CG40 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.48■□□□□ 0.55
SP9P0CG40 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SP9P0CG40 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.48■□□□□ 0.55
SP9P0CG40 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SP9P0CG40 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SP9P0CG40 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SP9P0CG40 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
SP9P0CG40 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.47■□□□□ 0.55
SP9P0CG40 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SP9P0CG40 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SP9P0CG40 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SP9P0CG40 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SP9P0CG40 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SP9P0CG40 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.47■□□□□ 0.55
SP9P0CG40 AC034105.1-201ENST00000563488 319 ntBASIC18.47■□□□□ 0.55
SP9P0CG40 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.47■□□□□ 0.55
SP9P0CG40 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.47■□□□□ 0.55
SP9P0CG40 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SP9P0CG40 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SP9P0CG40 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SP9P0CG40 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SP9P0CG40 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SP9P0CG40 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SP9P0CG40 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SP9P0CG40 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
SP9P0CG40 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SP9P0CG40 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SP9P0CG40 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SP9P0CG40 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SP9P0CG40 RCN1P2-201ENST00000398357 915 ntBASIC18.46■□□□□ 0.55
SP9P0CG40 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms