Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC11.71□□□□□ -0.53
APOBP04114 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC11.71□□□□□ -0.53
APOBP04114 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC11.71□□□□□ -0.53
APOBP04114 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOBP04114 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.71□□□□□ -0.53
APOBP04114 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOBP04114 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC11.71□□□□□ -0.53
APOBP04114 AF186996.4-201ENST00000467186 377 ntBASIC11.71□□□□□ -0.53
APOBP04114 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOBP04114 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC11.71□□□□□ -0.53
APOBP04114 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOBP04114 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
APOBP04114 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC11.71□□□□□ -0.53
APOBP04114 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
APOBP04114 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC11.71□□□□□ -0.53
APOBP04114 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC11.71□□□□□ -0.54
APOBP04114 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
APOBP04114 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
APOBP04114 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
APOBP04114 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC11.71□□□□□ -0.54
APOBP04114 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOBP04114 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOBP04114 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
APOBP04114 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.71□□□□□ -0.54
APOBP04114 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
APOBP04114 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
APOBP04114 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
APOBP04114 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC11.71□□□□□ -0.54
APOBP04114 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC11.71□□□□□ -0.54
APOBP04114 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
APOBP04114 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
APOBP04114 AP006288.1-201ENST00000446065 395 ntBASIC11.7□□□□□ -0.54
APOBP04114 DNAJB3-202ENST00000449667 1266 ntBASIC11.7□□□□□ -0.54
APOBP04114 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.7□□□□□ -0.54
APOBP04114 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.7□□□□□ -0.54
APOBP04114 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11.7□□□□□ -0.54
APOBP04114 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.7□□□□□ -0.54
APOBP04114 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC11.7□□□□□ -0.54
APOBP04114 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC11.7□□□□□ -0.54
APOBP04114 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC11.7□□□□□ -0.54
APOBP04114 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.7□□□□□ -0.54
APOBP04114 HOXB1-202ENST00000577092 1414 ntBASIC11.7□□□□□ -0.54
APOBP04114 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.7□□□□□ -0.54
APOBP04114 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.7□□□□□ -0.54
APOBP04114 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
APOBP04114 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.7□□□□□ -0.54
APOBP04114 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC11.7□□□□□ -0.54
APOBP04114 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.7□□□□□ -0.54
APOBP04114 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC11.7□□□□□ -0.54
APOBP04114 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.7□□□□□ -0.54
APOBP04114 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
APOBP04114 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
APOBP04114 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 AL162377.1-201ENST00000618844 1793 ntBASIC11.7□□□□□ -0.54
APOBP04114 AC009533.2-201ENST00000543664 586 ntBASIC11.7□□□□□ -0.54
APOBP04114 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOBP04114 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC11.7□□□□□ -0.54
APOBP04114 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
APOBP04114 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC11.69□□□□□ -0.54
APOBP04114 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOBP04114 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOBP04114 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
APOBP04114 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.69□□□□□ -0.54
APOBP04114 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.69□□□□□ -0.54
APOBP04114 HLA-J-202ENST00000469281 1241 ntBASIC11.69□□□□□ -0.54
APOBP04114 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOBP04114 AL109659.2-201ENST00000606809 1674 ntBASIC11.69□□□□□ -0.54
APOBP04114 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC11.69□□□□□ -0.54
APOBP04114 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOBP04114 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC11.69□□□□□ -0.54
APOBP04114 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
APOBP04114 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC11.69□□□□□ -0.54
APOBP04114 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOBP04114 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOBP04114 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOBP04114 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOBP04114 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOBP04114 MED15P5-201ENST00000423150 992 ntBASIC11.69□□□□□ -0.54
APOBP04114 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.69□□□□□ -0.54
APOBP04114 GPR32P1-201ENST00000601788 811 ntBASIC11.69□□□□□ -0.54
APOBP04114 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
APOBP04114 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms