Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.09■□□□□ 0.97
GGPS1O95749 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
GGPS1O95749 AC069148.1-201ENST00000608741 768 ntBASIC21.09■□□□□ 0.97
GGPS1O95749 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.09■□□□□ 0.97
GGPS1O95749 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.09■□□□□ 0.97
GGPS1O95749 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GGPS1O95749 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
GGPS1O95749 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.09■□□□□ 0.97
GGPS1O95749 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GGPS1O95749 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
GGPS1O95749 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GGPS1O95749 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 AC141586.3-201ENST00000562166 1838 ntBASIC21.08■□□□□ 0.97
GGPS1O95749 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
GGPS1O95749 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
GGPS1O95749 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
GGPS1O95749 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GGPS1O95749 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.08■□□□□ 0.97
GGPS1O95749 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GGPS1O95749 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
GGPS1O95749 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.08■□□□□ 0.96
GGPS1O95749 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
GGPS1O95749 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GGPS1O95749 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.08■□□□□ 0.96
GGPS1O95749 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GGPS1O95749 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GGPS1O95749 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
GGPS1O95749 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
GGPS1O95749 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.07■□□□□ 0.96
GGPS1O95749 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
GGPS1O95749 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.07■□□□□ 0.96
GGPS1O95749 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.07■□□□□ 0.96
GGPS1O95749 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
GGPS1O95749 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.07■□□□□ 0.96
GGPS1O95749 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.07■□□□□ 0.96
GGPS1O95749 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.07■□□□□ 0.96
GGPS1O95749 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.07■□□□□ 0.96
GGPS1O95749 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.07■□□□□ 0.96
GGPS1O95749 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
GGPS1O95749 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
GGPS1O95749 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GGPS1O95749 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.06■□□□□ 0.96
GGPS1O95749 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
GGPS1O95749 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.06■□□□□ 0.96
GGPS1O95749 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
GGPS1O95749 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.06■□□□□ 0.96
GGPS1O95749 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.06■□□□□ 0.96
GGPS1O95749 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.06■□□□□ 0.96
GGPS1O95749 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.06■□□□□ 0.96
GGPS1O95749 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.06■□□□□ 0.96
GGPS1O95749 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.06■□□□□ 0.96
GGPS1O95749 AL157888.1-201ENST00000631930 593 ntBASIC21.06■□□□□ 0.96
GGPS1O95749 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 FP475955.4-201ENST00000623131 1990 ntBASIC21.06■□□□□ 0.96
GGPS1O95749 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GGPS1O95749 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.06■□□□□ 0.96
GGPS1O95749 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.06■□□□□ 0.96
GGPS1O95749 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.06■□□□□ 0.96
GGPS1O95749 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.05■□□□□ 0.96
GGPS1O95749 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GGPS1O95749 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
GGPS1O95749 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms