Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PCF11O94913 AC006333.2-201ENST00000607957 2099 ntBASIC29.31■■■□□ 2.28
PCF11O94913 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCF11O94913 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
PCF11O94913 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCF11O94913 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCF11O94913 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCF11O94913 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCF11O94913 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC29.31■■■□□ 2.28
PCF11O94913 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC29.3■■■□□ 2.28
PCF11O94913 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC29.3■■■□□ 2.28
PCF11O94913 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC29.3■■■□□ 2.28
PCF11O94913 PRELID1P1-202ENST00000567272 903 ntBASIC29.3■■■□□ 2.28
PCF11O94913 AC139530.3-201ENST00000620344 690 ntBASIC29.3■■■□□ 2.28
PCF11O94913 AFG3L1P-217ENST00000557444 2447 ntBASIC29.3■■■□□ 2.28
PCF11O94913 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCF11O94913 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCF11O94913 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
PCF11O94913 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCF11O94913 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC29.3■■■□□ 2.28
PCF11O94913 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PCF11O94913 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PCF11O94913 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCF11O94913 FAAHP1-202ENST00000446499 1238 ntBASIC29.3■■■□□ 2.28
PCF11O94913 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
PCF11O94913 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PCF11O94913 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC29.3■■■□□ 2.28
PCF11O94913 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC29.3■■■□□ 2.28
PCF11O94913 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
PCF11O94913 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC29.29■■■□□ 2.28
PCF11O94913 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
PCF11O94913 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCF11O94913 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
PCF11O94913 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCF11O94913 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCF11O94913 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC29.29■■■□□ 2.28
PCF11O94913 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC29.29■■■□□ 2.28
PCF11O94913 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC29.29■■■□□ 2.28
PCF11O94913 IFNL4P1-201ENST00000607083 540 ntBASIC29.29■■■□□ 2.28
PCF11O94913 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC29.29■■■□□ 2.28
PCF11O94913 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCF11O94913 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC29.29■■■□□ 2.28
PCF11O94913 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
PCF11O94913 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCF11O94913 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCF11O94913 PBK-203ENST00000522944 1499 ntTSL 2 BASIC29.28■■■□□ 2.28
PCF11O94913 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCF11O94913 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
PCF11O94913 KRT8P50-201ENST00000562022 1438 ntBASIC29.28■■■□□ 2.28
PCF11O94913 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC29.28■■■□□ 2.28
PCF11O94913 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCF11O94913 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCF11O94913 MIR564-202ENST00000385049 94 ntBASIC29.28■■■□□ 2.28
PCF11O94913 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
PCF11O94913 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
PCF11O94913 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC29.28■■■□□ 2.28
PCF11O94913 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC29.28■■■□□ 2.28
PCF11O94913 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
PCF11O94913 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
PCF11O94913 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCF11O94913 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCF11O94913 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC29.28■■■□□ 2.28
PCF11O94913 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC29.28■■■□□ 2.28
PCF11O94913 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
PCF11O94913 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCF11O94913 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC29.27■■■□□ 2.28
PCF11O94913 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCF11O94913 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCF11O94913 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCF11O94913 CYP51A1P1-201ENST00000492267 1507 ntBASIC29.27■■■□□ 2.28
PCF11O94913 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
PCF11O94913 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
PCF11O94913 TSPY22P-201ENST00000427496 604 ntBASIC29.26■■■□□ 2.28
PCF11O94913 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC29.26■■■□□ 2.28
PCF11O94913 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
PCF11O94913 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
PCF11O94913 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
PCF11O94913 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC29.26■■■□□ 2.27
PCF11O94913 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC29.26■■■□□ 2.27
PCF11O94913 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC29.26■■■□□ 2.27
PCF11O94913 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PCF11O94913 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PCF11O94913 AL845331.1-201ENST00000424978 1190 ntBASIC29.26■■■□□ 2.27
PCF11O94913 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC29.26■■■□□ 2.27
PCF11O94913 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC29.26■■■□□ 2.27
PCF11O94913 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC29.26■■■□□ 2.27
PCF11O94913 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
PCF11O94913 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCF11O94913 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC29.25■■■□□ 2.27
PCF11O94913 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC29.25■■■□□ 2.27
PCF11O94913 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC29.25■■■□□ 2.27
PCF11O94913 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCF11O94913 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC29.25■■■□□ 2.27
PCF11O94913 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
PCF11O94913 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
PCF11O94913 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCF11O94913 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCF11O94913 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCF11O94913 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
PCF11O94913 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms