Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA12O60330 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA12O60330 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGA12O60330 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.62■□□□□ 0.57
PCDHGA12O60330 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA12O60330 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA12O60330 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA12O60330 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA12O60330 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA12O60330 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA12O60330 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA12O60330 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.61■□□□□ 0.57
PCDHGA12O60330 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA12O60330 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA12O60330 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGA12O60330 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA12O60330 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA12O60330 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA12O60330 HBZP1-201ENST00000354915 429 ntBASIC18.61■□□□□ 0.57
PCDHGA12O60330 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA12O60330 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGA12O60330 SPDYE13P-201ENST00000445314 798 ntBASIC18.61■□□□□ 0.57
PCDHGA12O60330 MIR4674-201ENST00000582457 87 ntBASIC18.61■□□□□ 0.57
PCDHGA12O60330 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA12O60330 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA12O60330 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA12O60330 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA12O60330 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA12O60330 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGA12O60330 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA12O60330 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA12O60330 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA12O60330 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA12O60330 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA12O60330 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA12O60330 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGA12O60330 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PCDHGA12O60330 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGA12O60330 AC034232.1-201ENST00000506026 1064 ntBASIC18.6■□□□□ 0.57
PCDHGA12O60330 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA12O60330 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PCDHGA12O60330 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGA12O60330 NPAP1P7-201ENST00000613027 823 ntBASIC18.6■□□□□ 0.57
PCDHGA12O60330 CR769767.2-201ENST00000622735 460 ntBASIC18.6■□□□□ 0.57
PCDHGA12O60330 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA12O60330 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA12O60330 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGA12O60330 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA12O60330 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA12O60330 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA12O60330 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGA12O60330 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA12O60330 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PCDHGA12O60330 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA12O60330 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA12O60330 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA12O60330 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA12O60330 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA12O60330 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA12O60330 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA12O60330 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PCDHGA12O60330 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGA12O60330 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA12O60330 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA12O60330 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA12O60330 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA12O60330 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA12O60330 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA12O60330 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA12O60330 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGA12O60330 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA12O60330 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PCDHGA12O60330 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PCDHGA12O60330 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA12O60330 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHGA12O60330 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHGA12O60330 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PCDHGA12O60330 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA12O60330 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA12O60330 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA12O60330 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHGA12O60330 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA12O60330 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA12O60330 TNXA-203ENST00000507684 2038 ntBASIC18.58■□□□□ 0.56
PCDHGA12O60330 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA12O60330 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA12O60330 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA12O60330 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHGA12O60330 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHGA12O60330 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA12O60330 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA12O60330 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA12O60330 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.58■□□□□ 0.56
PCDHGA12O60330 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA12O60330 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGA12O60330 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA12O60330 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGA12O60330 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGA12O60330 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA12O60330 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms