Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.82■□□□□ 0.6
MID1O15344 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.82■□□□□ 0.6
MID1O15344 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MID1O15344 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 KRT18P56-201ENST00000507275 550 ntBASIC18.82■□□□□ 0.6
MID1O15344 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.82■□□□□ 0.6
MID1O15344 AC069148.1-201ENST00000608741 768 ntBASIC18.82■□□□□ 0.6
MID1O15344 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
MID1O15344 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
MID1O15344 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MID1O15344 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MID1O15344 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.81■□□□□ 0.6
MID1O15344 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MID1O15344 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
MID1O15344 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MID1O15344 FP475955.4-201ENST00000623131 1990 ntBASIC18.81■□□□□ 0.6
MID1O15344 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MID1O15344 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MID1O15344 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MID1O15344 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MID1O15344 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
MID1O15344 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.81■□□□□ 0.6
MID1O15344 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MID1O15344 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.81■□□□□ 0.6
MID1O15344 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MID1O15344 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.81■□□□□ 0.6
MID1O15344 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.81■□□□□ 0.6
MID1O15344 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.81■□□□□ 0.6
MID1O15344 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.81■□□□□ 0.6
MID1O15344 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.81■□□□□ 0.6
MID1O15344 AL157888.1-201ENST00000631930 593 ntBASIC18.81■□□□□ 0.6
MID1O15344 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MID1O15344 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MID1O15344 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.81■□□□□ 0.6
MID1O15344 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MID1O15344 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.81■□□□□ 0.6
MID1O15344 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MID1O15344 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
MID1O15344 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MID1O15344 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MID1O15344 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MID1O15344 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MID1O15344 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
MID1O15344 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.8■□□□□ 0.6
MID1O15344 AC007952.6-201ENST00000573168 2673 ntBASIC18.8■□□□□ 0.6
MID1O15344 AC003957.1-201ENST00000625108 2673 ntBASIC18.8■□□□□ 0.6
MID1O15344 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MID1O15344 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MID1O15344 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
MID1O15344 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MID1O15344 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.8■□□□□ 0.6
MID1O15344 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MID1O15344 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MID1O15344 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MID1O15344 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MID1O15344 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MID1O15344 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MID1O15344 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.8■□□□□ 0.6
MID1O15344 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.8■□□□□ 0.6
MID1O15344 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.8■□□□□ 0.6
MID1O15344 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.8■□□□□ 0.6
MID1O15344 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MID1O15344 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.8■□□□□ 0.6
MID1O15344 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MID1O15344 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MID1O15344 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MID1O15344 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MID1O15344 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
MID1O15344 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MID1O15344 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MID1O15344 KRT8P32-201ENST00000512863 1461 ntBASIC18.79■□□□□ 0.6
MID1O15344 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MID1O15344 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
MID1O15344 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MID1O15344 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MID1O15344 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MID1O15344 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MID1O15344 AL645929.1-201ENST00000420084 975 ntBASIC18.79■□□□□ 0.6
MID1O15344 KRT18P23-201ENST00000435622 1283 ntBASIC18.79■□□□□ 0.6
MID1O15344 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.79■□□□□ 0.6
MID1O15344 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.79■□□□□ 0.6
MID1O15344 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.79■□□□□ 0.6
MID1O15344 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MID1O15344 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MID1O15344 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms