Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19■□□□□ 0.63
AP3B1O00203 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19■□□□□ 0.63
AP3B1O00203 AP000692.2-201ENST00000608391 879 ntBASIC19■□□□□ 0.63
AP3B1O00203 DGCR10-201ENST00000609839 495 ntBASIC19■□□□□ 0.63
AP3B1O00203 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19■□□□□ 0.63
AP3B1O00203 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19■□□□□ 0.63
AP3B1O00203 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
AP3B1O00203 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19■□□□□ 0.63
AP3B1O00203 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP3B1O00203 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19■□□□□ 0.63
AP3B1O00203 AC005082.1-201ENST00000413042 2259 ntBASIC18.99■□□□□ 0.63
AP3B1O00203 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
AP3B1O00203 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3B1O00203 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3B1O00203 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP3B1O00203 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3B1O00203 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.99■□□□□ 0.63
AP3B1O00203 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.99■□□□□ 0.63
AP3B1O00203 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3B1O00203 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3B1O00203 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP3B1O00203 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
AP3B1O00203 UBE2SP1-201ENST00000450587 669 ntBASIC18.99■□□□□ 0.63
AP3B1O00203 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.99■□□□□ 0.63
AP3B1O00203 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.99■□□□□ 0.63
AP3B1O00203 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.99■□□□□ 0.63
AP3B1O00203 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
AP3B1O00203 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3B1O00203 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP3B1O00203 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3B1O00203 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3B1O00203 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.99■□□□□ 0.63
AP3B1O00203 MTMR9LP-203ENST00000426597 1545 ntBASIC18.99■□□□□ 0.63
AP3B1O00203 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3B1O00203 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3B1O00203 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.99■□□□□ 0.63
AP3B1O00203 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.99■□□□□ 0.63
AP3B1O00203 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3B1O00203 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
AP3B1O00203 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3B1O00203 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3B1O00203 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.98■□□□□ 0.63
AP3B1O00203 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.98■□□□□ 0.63
AP3B1O00203 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3B1O00203 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3B1O00203 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.98■□□□□ 0.63
AP3B1O00203 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.98■□□□□ 0.63
AP3B1O00203 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.98■□□□□ 0.63
AP3B1O00203 AC011506.1-201ENST00000474329 610 ntBASIC18.98■□□□□ 0.63
AP3B1O00203 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP3B1O00203 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
AP3B1O00203 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.98■□□□□ 0.63
AP3B1O00203 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.98■□□□□ 0.63
AP3B1O00203 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
AP3B1O00203 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3B1O00203 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.98■□□□□ 0.63
AP3B1O00203 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
AP3B1O00203 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3B1O00203 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3B1O00203 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3B1O00203 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3B1O00203 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.98■□□□□ 0.63
AP3B1O00203 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
AP3B1O00203 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3B1O00203 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.98■□□□□ 0.63
AP3B1O00203 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3B1O00203 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3B1O00203 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3B1O00203 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3B1O00203 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3B1O00203 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3B1O00203 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.97■□□□□ 0.63
AP3B1O00203 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP3B1O00203 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3B1O00203 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3B1O00203 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3B1O00203 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3B1O00203 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
AP3B1O00203 CD177P1-201ENST00000606252 935 ntBASIC18.97■□□□□ 0.63
AP3B1O00203 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
AP3B1O00203 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
AP3B1O00203 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3B1O00203 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP3B1O00203 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP3B1O00203 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms