Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 AC064862.7-201ENST00000604520 867 ntBASIC18.37■□□□□ 0.53
C4orf47A7E2U8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.37■□□□□ 0.53
C4orf47A7E2U8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 AKR1C7P-201ENST00000305623 895 ntBASIC18.36■□□□□ 0.53
C4orf47A7E2U8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 MIR1233-2-201ENST00000408138 82 ntBASIC18.36■□□□□ 0.53
C4orf47A7E2U8 MIR1233-1-201ENST00000408722 82 ntBASIC18.36■□□□□ 0.53
C4orf47A7E2U8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 AC092183.1-201ENST00000469884 875 ntBASIC18.36■□□□□ 0.53
C4orf47A7E2U8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 AFG3L1P-217ENST00000557444 2447 ntBASIC18.36■□□□□ 0.53
C4orf47A7E2U8 AP001005.1-201ENST00000571755 1248 ntBASIC18.36■□□□□ 0.53
C4orf47A7E2U8 AIRN-201ENST00000601203 4374 ntBASIC18.36■□□□□ 0.53
C4orf47A7E2U8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C4orf47A7E2U8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 AC233702.3-201ENST00000578656 1387 ntBASIC18.35■□□□□ 0.53
C4orf47A7E2U8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 AC005332.3-201ENST00000589904 676 ntBASIC18.35■□□□□ 0.53
C4orf47A7E2U8 Z69720.1-201ENST00000601483 472 ntBASIC18.35■□□□□ 0.53
C4orf47A7E2U8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C4orf47A7E2U8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 SAPCD2P3-201ENST00000455031 850 ntBASIC18.34■□□□□ 0.53
C4orf47A7E2U8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 SLC25A1P1-201ENST00000528351 927 ntBASIC18.34■□□□□ 0.53
C4orf47A7E2U8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C4orf47A7E2U8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms