Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 AP005212.1-201ENST00000581547 1997 ntBASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 COX20P2-201ENST00000452636 358 ntBASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 AC012640.2-201ENST00000561606 901 ntBASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TMEM88BA6NKF7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 OR7E14P-202ENST00000530490 1290 ntBASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.81■■□□□ 1.08
TMEM88BA6NKF7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 AC023274.1-201ENST00000418278 595 ntBASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 AL645939.2-201ENST00000427340 991 ntBASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 SNHG9-202ENST00000564014 471 ntBASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 AC011467.4-201ENST00000594891 528 ntBASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 AC008556.1-201ENST00000610908 2040 ntBASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TMEM88BA6NKF7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 ZNF815P-204ENST00000434898 1737 ntBASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.79■■□□□ 1.08
TMEM88BA6NKF7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 TP73-AS1-210ENST00000637775 1455 ntBASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 AC007967.2-201ENST00000432613 625 ntBASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms