Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 AC093525.10-201ENST00000625130 1569 ntBASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.51■□□□□ 0.23
MBD3L4A6NDZ8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 AL121672.3-201ENST00000608644 468 ntBASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 NPAP1P7-201ENST00000613027 823 ntBASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 HEIH-201ENST00000623091 1652 ntBASIC16.5■□□□□ 0.23
MBD3L4A6NDZ8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 PVRIG2P-201ENST00000435460 978 ntBASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 BX276092.5-203ENST00000456199 560 ntBASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.49■□□□□ 0.23
MBD3L4A6NDZ8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 TSSC2-201ENST00000450217 709 ntBASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 KRT126P-201ENST00000549467 1181 ntBASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MBD3L4A6NDZ8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms