Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 Z98044.1-201ENST00000632503 1764 ntBASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 AC005829.2-201ENST00000571422 1056 ntBASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV25-1A0A075B6N4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 TFP1-202ENST00000475455 1573 ntBASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 AC006970.2-201ENST00000450065 779 ntBASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 SIRPAP1-201ENST00000448467 1770 ntBASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV25-1A0A075B6N4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 PCDHA12-202ENST00000613593 2588 ntBASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 AC084018.2-201ENST00000613093 2607 ntBASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 SLC29A4P1-201ENST00000398760 971 ntBASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 CDCA4P2-201ENST00000441182 718 ntBASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 ABALON-201ENST00000629058 1903 ntBASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV25-1A0A075B6N4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms