Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.37□□□□□ -2.63
CTSFQ9UBX1 RNU6-807P-201ENST00000516805 107 ntBASIC-1.37□□□□□ -2.63
CTSFQ9UBX1 RNU6-158P-201ENST00000517104 100 ntBASIC-1.37□□□□□ -2.63
CTSFQ9UBX1 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.37□□□□□ -2.63
CTSFQ9UBX1 RNU6-330P-201ENST00000363015 107 ntBASIC-1.38□□□□□ -2.63
CTSFQ9UBX1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.38□□□□□ -2.63
CTSFQ9UBX1 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.38□□□□□ -2.63
CTSFQ9UBX1 RNU6-624P-201ENST00000363411 107 ntBASIC-1.39□□□□□ -2.63
CTSFQ9UBX1 SNORD115-37-201ENST00000363768 82 ntBASIC-1.39□□□□□ -2.63
CTSFQ9UBX1 RNU6-478P-201ENST00000363904 110 ntBASIC-1.39□□□□□ -2.63
CTSFQ9UBX1 RNU6-645P-201ENST00000364649 106 ntBASIC-1.39□□□□□ -2.63
CTSFQ9UBX1 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.39□□□□□ -2.63
CTSFQ9UBX1 MIR4490-201ENST00000582647 84 ntBASIC-1.39□□□□□ -2.63
CTSFQ9UBX1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.39□□□□□ -2.63
CTSFQ9UBX1 RNU6-79P-201ENST00000362511 107 ntBASIC-1.4□□□□□ -2.63
CTSFQ9UBX1 MIR520D-201ENST00000385002 87 ntBASIC-1.4□□□□□ -2.63
CTSFQ9UBX1 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.4□□□□□ -2.63
CTSFQ9UBX1 MIR450A1-201ENST00000362262 91 ntBASIC-1.41□□□□□ -2.64
CTSFQ9UBX1 RNU6-608P-201ENST00000383927 104 ntBASIC-1.41□□□□□ -2.64
CTSFQ9UBX1 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.41□□□□□ -2.64
CTSFQ9UBX1 MIR548C-201ENST00000384815 97 ntBASIC-1.41□□□□□ -2.64
CTSFQ9UBX1 MIR548H1-201ENST00000408610 102 ntBASIC-1.41□□□□□ -2.64
CTSFQ9UBX1 RNU6-497P-201ENST00000365316 104 ntBASIC-1.42□□□□□ -2.64
CTSFQ9UBX1 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.42□□□□□ -2.64
CTSFQ9UBX1 MT-TR-201ENST00000387439 65 ntBASIC-1.42□□□□□ -2.64
CTSFQ9UBX1 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.42□□□□□ -2.64
CTSFQ9UBX1 AC093729.1-201ENST00000513074 128 ntBASIC-1.42□□□□□ -2.64
CTSFQ9UBX1 RNA5SP180-201ENST00000516181 101 ntBASIC-1.42□□□□□ -2.64
CTSFQ9UBX1 RNU6-267P-201ENST00000516714 103 ntBASIC-1.42□□□□□ -2.64
CTSFQ9UBX1 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.42□□□□□ -2.64
CTSFQ9UBX1 RNU6-219P-201ENST00000364728 107 ntBASIC-1.43□□□□□ -2.64
CTSFQ9UBX1 MIR1246-201ENST00000636535 73 ntBASIC-1.43□□□□□ -2.64
CTSFQ9UBX1 RNU6-228P-201ENST00000362700 106 ntBASIC-1.44□□□□□ -2.64
CTSFQ9UBX1 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.44□□□□□ -2.64
CTSFQ9UBX1 MIR3675-201ENST00000583661 73 ntBASIC-1.44□□□□□ -2.64
CTSFQ9UBX1 SNORD18.1-201ENST00000363807 70 ntBASIC-1.45□□□□□ -2.64
CTSFQ9UBX1 RNU6-22P-201ENST00000384355 107 ntBASIC-1.45□□□□□ -2.64
CTSFQ9UBX1 MIR548Q-201ENST00000408404 100 ntBASIC-1.45□□□□□ -2.64
CTSFQ9UBX1 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.45□□□□□ -2.64
CTSFQ9UBX1 RNU6-402P-201ENST00000410678 103 ntBASIC-1.45□□□□□ -2.64
CTSFQ9UBX1 MIR3671-201ENST00000580455 88 ntBASIC-1.45□□□□□ -2.64
CTSFQ9UBX1 MIR2052-201ENST00000636055 55 ntBASIC-1.45□□□□□ -2.64
CTSFQ9UBX1 RNU6-834P-201ENST00000362367 110 ntBASIC-1.46□□□□□ -2.64
CTSFQ9UBX1 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.46□□□□□ -2.64
CTSFQ9UBX1 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.46□□□□□ -2.64
CTSFQ9UBX1 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.46□□□□□ -2.64
CTSFQ9UBX1 RNU6-400P-201ENST00000391173 106 ntBASIC-1.46□□□□□ -2.64
CTSFQ9UBX1 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.47□□□□□ -2.64
CTSFQ9UBX1 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.47□□□□□ -2.64
CTSFQ9UBX1 RNU6-458P-201ENST00000384179 107 ntBASIC-1.47□□□□□ -2.64
CTSFQ9UBX1 AC018880.2-201ENST00000414265 201 ntBASIC-1.47□□□□□ -2.64
CTSFQ9UBX1 AL031737.1-201ENST00000450125 223 ntBASIC-1.47□□□□□ -2.64
CTSFQ9UBX1 AC108019.1-201ENST00000512540 175 ntBASIC-1.47□□□□□ -2.64
CTSFQ9UBX1 RNU6-982P-201ENST00000516216 102 ntBASIC-1.47□□□□□ -2.64
CTSFQ9UBX1 RNU7-174P-201ENST00000516248 59 ntBASIC-1.47□□□□□ -2.64
CTSFQ9UBX1 RNU6-303P-201ENST00000517091 106 ntBASIC-1.47□□□□□ -2.64
CTSFQ9UBX1 U6.58-201ENST00000613107 107 ntBASIC-1.47□□□□□ -2.64
CTSFQ9UBX1 AP001318.4-201ENST00000616637 121 ntBASIC-1.47□□□□□ -2.64
CTSFQ9UBX1 MALAT1.1-201ENST00000618249 95 ntBASIC-1.47□□□□□ -2.64
CTSFQ9UBX1 MIR548BB-201ENST00000626714 66 ntBASIC-1.47□□□□□ -2.64
CTSFQ9UBX1 RNU6-563P-201ENST00000364872 108 ntBASIC-1.48□□□□□ -2.65
CTSFQ9UBX1 RNU6-630P-201ENST00000391258 106 ntBASIC-1.48□□□□□ -2.65
CTSFQ9UBX1 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.48□□□□□ -2.65
CTSFQ9UBX1 RNU6-557P-201ENST00000516842 110 ntBASIC-1.48□□□□□ -2.65
CTSFQ9UBX1 MIR4756-201ENST00000577874 78 ntBASIC-1.48□□□□□ -2.65
CTSFQ9UBX1 MIR3668-201ENST00000582138 75 ntBASIC-1.48□□□□□ -2.65
CTSFQ9UBX1 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.49□□□□□ -2.65
CTSFQ9UBX1 SNORD116-22-201ENST00000384430 92 ntBASIC-1.49□□□□□ -2.65
CTSFQ9UBX1 RNU6-604P-201ENST00000390917 100 ntBASIC-1.49□□□□□ -2.65
CTSFQ9UBX1 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.49□□□□□ -2.65
CTSFQ9UBX1 SNORA8.1-201ENST00000384250 140 ntBASIC-1.5□□□□□ -2.65
CTSFQ9UBX1 RNU6-696P-201ENST00000390834 107 ntBASIC-1.5□□□□□ -2.65
CTSFQ9UBX1 RNY4P18-201ENST00000391107 89 ntBASIC-1.5□□□□□ -2.65
CTSFQ9UBX1 MIR1285-2-201ENST00000408311 88 ntBASIC-1.5□□□□□ -2.65
CTSFQ9UBX1 AC074348.1-201ENST00000426503 132 ntBASIC-1.5□□□□□ -2.65
CTSFQ9UBX1 RNU6-983P-201ENST00000516004 103 ntBASIC-1.5□□□□□ -2.65
CTSFQ9UBX1 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.5□□□□□ -2.65
CTSFQ9UBX1 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.51□□□□□ -2.65
CTSFQ9UBX1 MIR488-201ENST00000365739 83 ntBASIC-1.51□□□□□ -2.65
CTSFQ9UBX1 SNX3P1X-201ENST00000414887 175 ntBASIC-1.51□□□□□ -2.65
CTSFQ9UBX1 SNORD45.1-201ENST00000363181 77 ntBASIC-1.52□□□□□ -2.65
CTSFQ9UBX1 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.52□□□□□ -2.65
CTSFQ9UBX1 RNU6-598P-201ENST00000364017 105 ntBASIC-1.52□□□□□ -2.65
CTSFQ9UBX1 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.52□□□□□ -2.65
CTSFQ9UBX1 RNU6-686P-201ENST00000364839 107 ntBASIC-1.52□□□□□ -2.65
CTSFQ9UBX1 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.52□□□□□ -2.65
CTSFQ9UBX1 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.52□□□□□ -2.65
CTSFQ9UBX1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.52□□□□□ -2.65
CTSFQ9UBX1 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.52□□□□□ -2.65
CTSFQ9UBX1 RNU6-587P-201ENST00000391282 106 ntBASIC-1.52□□□□□ -2.65
CTSFQ9UBX1 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.53□□□□□ -2.65
CTSFQ9UBX1 RNU6-695P-201ENST00000391157 104 ntBASIC-1.53□□□□□ -2.65
CTSFQ9UBX1 SNORA40.13-201ENST00000516379 120 ntBASIC-1.53□□□□□ -2.65
CTSFQ9UBX1 U2.18-201ENST00000622185 84 ntBASIC-1.53□□□□□ -2.65
CTSFQ9UBX1 MIR429-201ENST00000362106 83 ntBASIC-1.54□□□□□ -2.66
CTSFQ9UBX1 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.54□□□□□ -2.66
CTSFQ9UBX1 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.54□□□□□ -2.66
CTSFQ9UBX1 RNU6-698P-201ENST00000363523 107 ntBASIC-1.55□□□□□ -2.66
CTSFQ9UBX1 RNU6-34P-201ENST00000364874 107 ntBASIC-1.55□□□□□ -2.66
CTSFQ9UBX1 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms