Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR30E-201ENST00000362104 92 ntBASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR518B-201ENST00000385127 83 ntBASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 Y_RNA.647-201ENST00000459194 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 Y_RNA.640-201ENST00000459296 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 AC097484.2-201ENST00000509147 251 ntBASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 TRMT112P2-201ENST00000512910 132 ntBASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR3198-2-201ENST00000577868 80 ntBASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR4263-201ENST00000584745 83 ntBASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 Y_RNA.803-201ENST00000614432 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 Y_RNA.815-201ENST00000616655 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 5S_rRNA.12-201ENST00000617631 107 ntBASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 Y_RNA.795-201ENST00000619475 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 Y_RNA.827-201ENST00000638104 112 ntBASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
KRTAP4-11Q9BYQ6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
KRTAP4-11Q9BYQ6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-11Q9BYQ6 SNORA36.2-201ENST00000384004 127 ntBASIC0.7□□□□□ -2.3
KRTAP4-11Q9BYQ6 RNU6-42P-201ENST00000384165 107 ntBASIC0.7□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR548J-201ENST00000408833 112 ntBASIC0.7□□□□□ -2.3
KRTAP4-11Q9BYQ6 RNA5SP449-201ENST00000516871 130 ntBASIC0.7□□□□□ -2.3
KRTAP4-11Q9BYQ6 SCARNA20.6-201ENST00000517251 106 ntBASIC0.7□□□□□ -2.3
KRTAP4-11Q9BYQ6 CR383656.4-201ENST00000546909 122 ntBASIC0.7□□□□□ -2.3
KRTAP4-11Q9BYQ6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KRTAP4-11Q9BYQ6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR140-201ENST00000385282 100 ntBASIC0.69□□□□□ -2.3
KRTAP4-11Q9BYQ6 AP000533.3-201ENST00000447704 118 ntBASIC0.69□□□□□ -2.3
KRTAP4-11Q9BYQ6 RNA5SP102-201ENST00000516865 106 ntBASIC0.69□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR7153-201ENST00000637758 57 ntBASIC0.69□□□□□ -2.3
KRTAP4-11Q9BYQ6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR146A-201ENST00000385201 99 ntBASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR1276-201ENST00000408707 83 ntBASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 RNA5SP274-201ENST00000410484 108 ntBASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 SNORA64.4-201ENST00000516632 81 ntBASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR2276-201ENST00000516886 89 ntBASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR3123-201ENST00000583417 75 ntBASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR6504-201ENST00000613520 61 ntBASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR6873-201ENST00000622788 63 ntBASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 AC073476.4-201ENST00000628409 72 ntBASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
KRTAP4-11Q9BYQ6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC0.67□□□□□ -2.3
KRTAP4-11Q9BYQ6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC0.67□□□□□ -2.3
KRTAP4-11Q9BYQ6 SNORD56.3-201ENST00000363507 71 ntBASIC0.67□□□□□ -2.3
KRTAP4-11Q9BYQ6 Y_RNA.189-201ENST00000363959 112 ntBASIC0.67□□□□□ -2.3
KRTAP4-11Q9BYQ6 RNU6-164P-201ENST00000364604 103 ntBASIC0.67□□□□□ -2.3
KRTAP4-11Q9BYQ6 AC244250.2-201ENST00000418731 148 ntBASIC0.67□□□□□ -2.3
KRTAP4-11Q9BYQ6 HMGN1P18-201ENST00000457642 277 ntBASIC0.67□□□□□ -2.3
KRTAP4-11Q9BYQ6 AC092185.1-201ENST00000491371 97 ntBASIC0.67□□□□□ -2.3
KRTAP4-11Q9BYQ6 RNA5SP385-201ENST00000515947 110 ntBASIC0.67□□□□□ -2.3
KRTAP4-11Q9BYQ6 RNA5SP220-201ENST00000516298 104 ntBASIC0.67□□□□□ -2.3
KRTAP4-11Q9BYQ6 AC245884.12-201ENST00000615364 59 ntBASIC0.67□□□□□ -2.3
KRTAP4-11Q9BYQ6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR26A1-201ENST00000362205 77 ntBASIC0.66□□□□□ -2.3
KRTAP4-11Q9BYQ6 RNA5SP327-201ENST00000362494 101 ntBASIC0.66□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR618-201ENST00000385287 98 ntBASIC0.66□□□□□ -2.3
KRTAP4-11Q9BYQ6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC0.66□□□□□ -2.3
KRTAP4-11Q9BYQ6 AP1B1P2-201ENST00000416196 106 ntBASIC0.66□□□□□ -2.3
KRTAP4-11Q9BYQ6 HMGN2P19-201ENST00000425149 265 ntBASIC0.66□□□□□ -2.3
KRTAP4-11Q9BYQ6 RNA5SP61-201ENST00000516453 100 ntBASIC0.66□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR6845-201ENST00000613182 61 ntBASIC0.66□□□□□ -2.3
KRTAP4-11Q9BYQ6 SNORA50A-202ENST00000629536 136 ntBASIC0.66□□□□□ -2.3
KRTAP4-11Q9BYQ6 MIR219B-201ENST00000637023 88 ntBASIC0.66□□□□□ -2.3
KRTAP4-11Q9BYQ6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
KRTAP4-11Q9BYQ6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.3
KRTAP4-11Q9BYQ6 SNORD114-24-201ENST00000365029 72 ntBASIC0.65□□□□□ -2.31
KRTAP4-11Q9BYQ6 RNU6-805P-201ENST00000365643 106 ntBASIC0.65□□□□□ -2.31
KRTAP4-11Q9BYQ6 RNU1-143P-201ENST00000516296 146 ntBASIC0.65□□□□□ -2.31
KRTAP4-11Q9BYQ6 SNORA62.5-201ENST00000516634 120 ntBASIC0.65□□□□□ -2.31
KRTAP4-11Q9BYQ6 MIR4452-201ENST00000583004 71 ntBASIC0.65□□□□□ -2.31
KRTAP4-11Q9BYQ6 MIR4506-201ENST00000584693 77 ntBASIC0.65□□□□□ -2.31
KRTAP4-11Q9BYQ6 BX248123.2-201ENST00000606318 124 ntBASIC0.65□□□□□ -2.31
KRTAP4-11Q9BYQ6 U1.23-201ENST00000610293 146 ntBASIC0.65□□□□□ -2.31
KRTAP4-11Q9BYQ6 RNU1-68P-201ENST00000615382 146 ntBASIC0.65□□□□□ -2.31
KRTAP4-11Q9BYQ6 MIR6734-201ENST00000621166 68 ntBASIC0.65□□□□□ -2.31
KRTAP4-11Q9BYQ6 U1.39-201ENST00000621562 146 ntBASIC0.65□□□□□ -2.31
KRTAP4-11Q9BYQ6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC0.65□□□□□ -2.31
KRTAP4-11Q9BYQ6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
KRTAP4-11Q9BYQ6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
KRTAP4-11Q9BYQ6 MIR583-201ENST00000384846 75 ntBASIC0.64□□□□□ -2.31
KRTAP4-11Q9BYQ6 MIR216A-201ENST00000385063 110 ntBASIC0.64□□□□□ -2.31
KRTAP4-11Q9BYQ6 RNU6-56P-201ENST00000516986 93 ntBASIC0.64□□□□□ -2.31
KRTAP4-11Q9BYQ6 RNA5SP380-201ENST00000517190 98 ntBASIC0.64□□□□□ -2.31
KRTAP4-11Q9BYQ6 MIR3179-1-201ENST00000578940 84 ntBASIC0.64□□□□□ -2.31
KRTAP4-11Q9BYQ6 MIR3179-2-201ENST00000579107 84 ntBASIC0.64□□□□□ -2.31
KRTAP4-11Q9BYQ6 MIR3179-3-201ENST00000579566 84 ntBASIC0.64□□□□□ -2.31
KRTAP4-11Q9BYQ6 AL731768.1-201ENST00000603124 139 ntBASIC0.64□□□□□ -2.31
KRTAP4-11Q9BYQ6 MIR3179-4-201ENST00000617599 84 ntBASIC0.64□□□□□ -2.31
KRTAP4-11Q9BYQ6 MIR6818-201ENST00000621576 65 ntBASIC0.64□□□□□ -2.31
KRTAP4-11Q9BYQ6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC0.64□□□□□ -2.31
KRTAP4-11Q9BYQ6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
KRTAP4-11Q9BYQ6 MIR524-201ENST00000385242 87 ntBASIC0.63□□□□□ -2.31
KRTAP4-11Q9BYQ6 MIR892B-201ENST00000401279 77 ntBASIC0.63□□□□□ -2.31
KRTAP4-11Q9BYQ6 RNA5SP217-201ENST00000515959 91 ntBASIC0.63□□□□□ -2.31
KRTAP4-11Q9BYQ6 RNU6-180P-201ENST00000516697 61 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 257.9 ms