Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 AC083906.6-201ENST00000641366 219 ntBASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNMT3AQ9Y6K1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 HEIH-201ENST00000623091 1652 ntBASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNMT3AQ9Y6K1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 KRT8P7-201ENST00000533003 1432 ntBASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 MIR564-202ENST00000385049 94 ntBASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 TMPOP1-202ENST00000424642 1267 ntBASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 COX11P1-201ENST00000489116 835 ntBASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 KRT18P21-201ENST00000515767 1272 ntBASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.41■□□□□ 0.54
DNMT3AQ9Y6K1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 RN7SL850P-201ENST00000579959 291 ntBASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.4■□□□□ 0.54
DNMT3AQ9Y6K1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms