Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 LINC01311-201ENST00000565162 1445 ntBASIC17.58■□□□□ 0.41
PCDHGA9Q9Y5G4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 ATP5G2P1-201ENST00000433580 426 ntBASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGA9Q9Y5G4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 AC026396.1-201ENST00000419388 421 ntBASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA9Q9Y5G4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA9Q9Y5G4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA9Q9Y5G4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms