Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.72■□□□□ 0.91
NOD1Q9Y239 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.72■□□□□ 0.91
NOD1Q9Y239 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NOD1Q9Y239 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NOD1Q9Y239 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.72■□□□□ 0.91
NOD1Q9Y239 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NOD1Q9Y239 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NOD1Q9Y239 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NOD1Q9Y239 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.72■□□□□ 0.91
NOD1Q9Y239 NUS1P1-201ENST00000446295 882 ntBASIC20.72■□□□□ 0.91
NOD1Q9Y239 AP000867.3-201ENST00000524675 377 ntBASIC20.72■□□□□ 0.91
NOD1Q9Y239 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
NOD1Q9Y239 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NOD1Q9Y239 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.72■□□□□ 0.91
NOD1Q9Y239 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NOD1Q9Y239 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NOD1Q9Y239 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.72■□□□□ 0.91
NOD1Q9Y239 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NOD1Q9Y239 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NOD1Q9Y239 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.72■□□□□ 0.91
NOD1Q9Y239 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NOD1Q9Y239 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NOD1Q9Y239 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NOD1Q9Y239 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.71■□□□□ 0.91
NOD1Q9Y239 MIR662-201ENST00000384847 95 ntBASIC20.71■□□□□ 0.91
NOD1Q9Y239 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NOD1Q9Y239 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NOD1Q9Y239 LINC00265-3P-201ENST00000447588 903 ntBASIC20.71■□□□□ 0.91
NOD1Q9Y239 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
NOD1Q9Y239 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.71■□□□□ 0.91
NOD1Q9Y239 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NOD1Q9Y239 LINC01711-201ENST00000598340 967 ntBASIC20.71■□□□□ 0.91
NOD1Q9Y239 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.71■□□□□ 0.91
NOD1Q9Y239 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NOD1Q9Y239 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NOD1Q9Y239 RCC2P3-201ENST00000418112 1537 ntBASIC20.71■□□□□ 0.91
NOD1Q9Y239 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.71■□□□□ 0.91
NOD1Q9Y239 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.71■□□□□ 0.91
NOD1Q9Y239 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NOD1Q9Y239 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NOD1Q9Y239 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NOD1Q9Y239 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
NOD1Q9Y239 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NOD1Q9Y239 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NOD1Q9Y239 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 UNC93B7-201ENST00000509439 705 ntBASIC20.7■□□□□ 0.9
NOD1Q9Y239 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.7■□□□□ 0.9
NOD1Q9Y239 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.7■□□□□ 0.9
NOD1Q9Y239 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.7■□□□□ 0.9
NOD1Q9Y239 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.7■□□□□ 0.9
NOD1Q9Y239 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.7■□□□□ 0.9
NOD1Q9Y239 IFNL4P1-201ENST00000607083 540 ntBASIC20.7■□□□□ 0.9
NOD1Q9Y239 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
NOD1Q9Y239 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.7■□□□□ 0.9
NOD1Q9Y239 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NOD1Q9Y239 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NOD1Q9Y239 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.69■□□□□ 0.9
NOD1Q9Y239 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NOD1Q9Y239 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NOD1Q9Y239 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NOD1Q9Y239 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NOD1Q9Y239 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.69■□□□□ 0.9
NOD1Q9Y239 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.69■□□□□ 0.9
NOD1Q9Y239 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NOD1Q9Y239 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NOD1Q9Y239 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.69■□□□□ 0.9
NOD1Q9Y239 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.69■□□□□ 0.9
NOD1Q9Y239 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NOD1Q9Y239 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NOD1Q9Y239 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.69■□□□□ 0.9
NOD1Q9Y239 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.69■□□□□ 0.9
NOD1Q9Y239 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.69■□□□□ 0.9
NOD1Q9Y239 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.69■□□□□ 0.9
NOD1Q9Y239 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NOD1Q9Y239 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.69■□□□□ 0.9
NOD1Q9Y239 AL109659.2-201ENST00000606809 1674 ntBASIC20.69■□□□□ 0.9
NOD1Q9Y239 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NOD1Q9Y239 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NOD1Q9Y239 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NOD1Q9Y239 KRT8P10-201ENST00000450021 1447 ntBASIC20.69■□□□□ 0.9
NOD1Q9Y239 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NOD1Q9Y239 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.69■□□□□ 0.9
NOD1Q9Y239 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NOD1Q9Y239 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NOD1Q9Y239 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.68■□□□□ 0.9
NOD1Q9Y239 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NOD1Q9Y239 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms