Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 AL845331.1-201ENST00000424978 1190 ntBASIC24.58■■□□□ 1.53
SPG7Q9UQ90 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.58■■□□□ 1.52
SPG7Q9UQ90 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
SPG7Q9UQ90 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SPG7Q9UQ90 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC24.58■■□□□ 1.52
SPG7Q9UQ90 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
SPG7Q9UQ90 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
SPG7Q9UQ90 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 DRAXINP1-201ENST00000437611 948 ntBASIC24.57■■□□□ 1.52
SPG7Q9UQ90 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 TPSP2-201ENST00000561760 610 ntBASIC24.57■■□□□ 1.52
SPG7Q9UQ90 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 TBCB-205ENST00000585746 875 ntTSL 3 BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.57■■□□□ 1.52
SPG7Q9UQ90 FEM1AP3-201ENST00000403722 1741 ntBASIC24.57■■□□□ 1.52
SPG7Q9UQ90 KRT8P32-201ENST00000512863 1461 ntBASIC24.57■■□□□ 1.52
SPG7Q9UQ90 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 BAALC-202ENST00000306391 243 ntTSL 5 BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 BAALC-204ENST00000330955 222 ntTSL 5 BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 FAAHP1-202ENST00000446499 1238 ntBASIC24.56■■□□□ 1.52
SPG7Q9UQ90 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SPG7Q9UQ90 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
SPG7Q9UQ90 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 FDX1P1-201ENST00000449115 551 ntBASIC24.54■■□□□ 1.52
SPG7Q9UQ90 CIB2-208ENST00000560618 804 ntTSL 2 BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SPG7Q9UQ90 Z83836.1-201ENST00000624605 1642 ntBASIC24.53■■□□□ 1.52
SPG7Q9UQ90 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC24.53■■□□□ 1.52
SPG7Q9UQ90 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SPG7Q9UQ90 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms