Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.88■□□□□ 0.77
CDH9Q9ULB4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH9Q9ULB4 HEIH-201ENST00000623091 1652 ntBASIC19.87■□□□□ 0.77
CDH9Q9ULB4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.87■□□□□ 0.77
CDH9Q9ULB4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.87■□□□□ 0.77
CDH9Q9ULB4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 AC112497.1-201ENST00000624824 639 ntBASIC19.87■□□□□ 0.77
CDH9Q9ULB4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH9Q9ULB4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 KRT8P7-201ENST00000533003 1432 ntBASIC19.86■□□□□ 0.77
CDH9Q9ULB4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 AC024243.1-201ENST00000609234 778 ntBASIC19.86■□□□□ 0.77
CDH9Q9ULB4 AC083906.6-201ENST00000641366 219 ntBASIC19.86■□□□□ 0.77
CDH9Q9ULB4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH9Q9ULB4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH9Q9ULB4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms