Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 AC093458.2-201ENST00000623150 629 ntBASIC19.42■□□□□ 0.7
VPS45Q9NRW7 AL031432.5-201ENST00000641059 760 ntBASIC19.42■□□□□ 0.7
VPS45Q9NRW7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 HOMER2P1-201ENST00000455653 964 ntBASIC19.41■□□□□ 0.7
VPS45Q9NRW7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 AC011298.2-201ENST00000617989 482 ntBASIC19.41■□□□□ 0.7
VPS45Q9NRW7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 FP475955.4-201ENST00000623131 1990 ntBASIC19.41■□□□□ 0.7
VPS45Q9NRW7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS45Q9NRW7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 MFAP1P1-201ENST00000442257 1255 ntBASIC19.4■□□□□ 0.7
VPS45Q9NRW7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 AL512604.3-201ENST00000569583 964 ntBASIC19.4■□□□□ 0.7
VPS45Q9NRW7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 AC141257.4-201ENST00000634557 245 ntBASIC19.4■□□□□ 0.7
VPS45Q9NRW7 AC136944.6-201ENST00000634818 245 ntBASIC19.4■□□□□ 0.7
VPS45Q9NRW7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 RCC2P6-201ENST00000526625 1557 ntBASIC19.4■□□□□ 0.7
VPS45Q9NRW7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
VPS45Q9NRW7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
VPS45Q9NRW7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.39■□□□□ 0.7
VPS45Q9NRW7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
VPS45Q9NRW7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.39■□□□□ 0.7
VPS45Q9NRW7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.39■□□□□ 0.7
VPS45Q9NRW7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 AL161938.1-201ENST00000569833 2180 ntBASIC19.39■□□□□ 0.69
VPS45Q9NRW7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.39■□□□□ 0.69
VPS45Q9NRW7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
VPS45Q9NRW7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms