Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 AC120498.9-201ENST00000339021 3867 ntBASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 BX088651.1-201ENST00000540551 451 ntBASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 AP000525.1-201ENST00000608286 694 ntBASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.04■□□□□ 0.48
NECTIN3Q9NQS3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
NECTIN3Q9NQS3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 LTB4R2-202ENST00000528054 3092 ntBASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 FAM207BP-201ENST00000447172 505 ntBASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 AP000692.2-201ENST00000608391 879 ntBASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NECTIN3Q9NQS3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.02■□□□□ 0.47
NECTIN3Q9NQS3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NECTIN3Q9NQS3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
NECTIN3Q9NQS3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NECTIN3Q9NQS3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NECTIN3Q9NQS3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 MIR1238-201ENST00000408483 83 ntBASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 AL390955.1-201ENST00000428694 934 ntBASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 DGCR10-201ENST00000609839 495 ntBASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms