Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP29Q9HBJ7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
USP29Q9HBJ7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.4■□□□□ 0.7
USP29Q9HBJ7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.4■□□□□ 0.7
USP29Q9HBJ7 AC008040.2-201ENST00000461049 708 ntBASIC19.4■□□□□ 0.7
USP29Q9HBJ7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP29Q9HBJ7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
USP29Q9HBJ7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP29Q9HBJ7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.4■□□□□ 0.7
USP29Q9HBJ7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.4■□□□□ 0.7
USP29Q9HBJ7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.4■□□□□ 0.7
USP29Q9HBJ7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP29Q9HBJ7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP29Q9HBJ7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
USP29Q9HBJ7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP29Q9HBJ7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP29Q9HBJ7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
USP29Q9HBJ7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
USP29Q9HBJ7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.39■□□□□ 0.7
USP29Q9HBJ7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.39■□□□□ 0.7
USP29Q9HBJ7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 AC090164.3-201ENST00000610780 2143 ntBASIC19.39■□□□□ 0.69
USP29Q9HBJ7 FAM197Y1-201ENST00000421178 764 ntBASIC19.39■□□□□ 0.69
USP29Q9HBJ7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP29Q9HBJ7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 NUDT16P1-203ENST00000513809 620 ntBASIC19.38■□□□□ 0.69
USP29Q9HBJ7 PRSS44-201ENST00000515154 1146 ntBASIC19.38■□□□□ 0.69
USP29Q9HBJ7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 HEIH-201ENST00000623091 1652 ntBASIC19.38■□□□□ 0.69
USP29Q9HBJ7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
USP29Q9HBJ7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 KRT16P1-201ENST00000399124 1418 ntBASIC19.37■□□□□ 0.69
USP29Q9HBJ7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 RCN1P1-201ENST00000400413 996 ntBASIC19.37■□□□□ 0.69
USP29Q9HBJ7 AC004951.3-201ENST00000418645 1148 ntBASIC19.37■□□□□ 0.69
USP29Q9HBJ7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 AC130371.2-201ENST00000619443 611 ntBASIC19.37■□□□□ 0.69
USP29Q9HBJ7 CR392000.1-201ENST00000624770 1228 ntBASIC19.37■□□□□ 0.69
USP29Q9HBJ7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
USP29Q9HBJ7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.36■□□□□ 0.69
USP29Q9HBJ7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.36■□□□□ 0.69
USP29Q9HBJ7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
USP29Q9HBJ7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.36■□□□□ 0.69
USP29Q9HBJ7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP29Q9HBJ7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms