Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 AC106730.1-201ENST00000566722 1090 ntBASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2OQ9C0C9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
UBE2OQ9C0C9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 RNPS1P1-201ENST00000507437 918 ntBASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 AP005212.1-201ENST00000581547 1997 ntBASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2OQ9C0C9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 REXO1L6P-202ENST00000619970 1078 ntBASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 TP73-AS1-207ENST00000624167 988 ntBASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 AL391807.1-203ENST00000604392 2365 ntBASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 GABARAPL3-202ENST00000624044 1851 ntBASIC20.69■□□□□ 0.9
UBE2OQ9C0C9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 AF238378.1-201ENST00000526806 358 ntBASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 AC090616.6-201ENST00000582640 721 ntBASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 IGHV3-41-201ENST00000613121 348 ntBASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2OQ9C0C9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
UBE2OQ9C0C9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms