Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 MIR564-202ENST00000385049 94 ntBASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 AP000593.1-201ENST00000393668 712 ntBASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 AL592071.1-201ENST00000611956 408 ntBASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 AF228730.7-201ENST00000641842 219 ntBASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 Z82202.1-201ENST00000623446 1880 ntBASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-1Q9BYQ7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 HOXB1-202ENST00000577092 1414 ntBASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 FICD-205ENST00000552758 603 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 AC124864.1-201ENST00000623408 392 ntBASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 AC148477.8-201ENST00000624298 468 ntBASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 AC006333.2-201ENST00000607957 2099 ntBASIC9.75□□□□□ -0.85
KRTAP4-1Q9BYQ7 PCDHAC2-203ENST00000615316 3011 ntBASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 NSUN5P1-202ENST00000421140 1535 ntBASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 NSUN5P2-203ENST00000457352 1529 ntBASIC9.74□□□□□ -0.85
KRTAP4-1Q9BYQ7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms