Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 ABALON-201ENST00000629058 1903 ntBASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 TSPY20P-201ENST00000450910 630 ntBASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 RARRES2P10-201ENST00000564312 460 ntBASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 AC135776.1-201ENST00000319817 2481 ntBASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 AC079598.2-202ENST00000546624 1451 ntBASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RSPO3Q9BXY4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 PRORSD1P-201ENST00000295112 541 ntBASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RSPO3Q9BXY4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 PCDHB18P-201ENST00000524813 2368 ntBASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 AC098590.1-201ENST00000468126 897 ntBASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 AC073195.1-201ENST00000607241 877 ntBASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 MIR6786-201ENST00000616843 113 ntBASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 AL031985.4-201ENST00000642138 673 ntBASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.28■□□□□ 0.36
RSPO3Q9BXY4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 RCC2P3-201ENST00000418112 1537 ntBASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.27■□□□□ 0.36
RSPO3Q9BXY4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms