Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.05■□□□□ 0.64
COL25A1Q9BXS0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.05■□□□□ 0.64
COL25A1Q9BXS0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 AC097374.2-201ENST00000618617 1306 ntBASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 ATP5G2P4-201ENST00000442175 420 ntBASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 AC093214.1-201ENST00000511688 1107 ntBASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 AC093520.2-201ENST00000561830 333 ntBASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 AC025678.2-201ENST00000562061 970 ntBASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 AL031432.2-201ENST00000566714 459 ntBASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 AL928711.1-201ENST00000570165 459 ntBASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.04■□□□□ 0.64
COL25A1Q9BXS0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 CR383656.12-201ENST00000549567 513 ntBASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 AL121603.2-201ENST00000557373 2117 ntBASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL25A1Q9BXS0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 TFAMP1-201ENST00000412727 736 ntBASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 AP000344.2-201ENST00000512987 629 ntBASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 PDPK2P-202ENST00000562415 1191 ntBASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 AC024563.2-201ENST00000603282 481 ntBASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 AC073592.5-201ENST00000624854 528 ntBASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.02■□□□□ 0.64
COL25A1Q9BXS0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
COL25A1Q9BXS0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.02■□□□□ 0.63
COL25A1Q9BXS0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL25A1Q9BXS0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 MIR661-201ENST00000384842 89 ntBASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COL25A1Q9BXS0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL25A1Q9BXS0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19■□□□□ 0.63
COL25A1Q9BXS0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
COL25A1Q9BXS0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms