Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRFN3Q9BTN0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRFN3Q9BTN0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
LRFN3Q9BTN0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 AC012645.4-201ENST00000610691 1061 ntBASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 AC093512.1-201ENST00000617969 520 ntBASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.76■□□□□ 0.59
LRFN3Q9BTN0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 C1orf229-201ENST00000623686 2258 ntBASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 PRSS29P-201ENST00000440800 595 ntBASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 AC104390.1-201ENST00000555663 520 ntBASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 AC105339.3-201ENST00000560043 636 ntBASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 AC024563.2-201ENST00000603282 481 ntBASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRFN3Q9BTN0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 AC133561.1-201ENST00000568600 2415 ntBASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 AC009947.1-201ENST00000444350 727 ntBASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 AC064836.3-201ENST00000607928 673 ntBASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
LRFN3Q9BTN0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms