Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
USB1Q9BQ65 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USB1Q9BQ65 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
USB1Q9BQ65 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.77■□□□□ 0.28
USB1Q9BQ65 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USB1Q9BQ65 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USB1Q9BQ65 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USB1Q9BQ65 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.77■□□□□ 0.28
USB1Q9BQ65 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USB1Q9BQ65 RCN1P1-201ENST00000400413 996 ntBASIC16.77■□□□□ 0.28
USB1Q9BQ65 ATP5G1P1-201ENST00000448724 379 ntBASIC16.77■□□□□ 0.28
USB1Q9BQ65 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.77■□□□□ 0.28
USB1Q9BQ65 KRT18P21-201ENST00000515767 1272 ntBASIC16.77■□□□□ 0.28
USB1Q9BQ65 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.77■□□□□ 0.28
USB1Q9BQ65 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.77■□□□□ 0.28
USB1Q9BQ65 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.77■□□□□ 0.28
USB1Q9BQ65 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USB1Q9BQ65 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.77■□□□□ 0.28
USB1Q9BQ65 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USB1Q9BQ65 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
USB1Q9BQ65 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USB1Q9BQ65 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
USB1Q9BQ65 AC116562.4-201ENST00000641316 2276 ntBASIC16.77■□□□□ 0.27
USB1Q9BQ65 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.77■□□□□ 0.27
USB1Q9BQ65 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.77■□□□□ 0.27
USB1Q9BQ65 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.77■□□□□ 0.27
USB1Q9BQ65 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.77■□□□□ 0.27
USB1Q9BQ65 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
USB1Q9BQ65 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
USB1Q9BQ65 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
USB1Q9BQ65 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.77■□□□□ 0.27
USB1Q9BQ65 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
USB1Q9BQ65 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
USB1Q9BQ65 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.77■□□□□ 0.27
USB1Q9BQ65 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.76■□□□□ 0.27
USB1Q9BQ65 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
USB1Q9BQ65 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
USB1Q9BQ65 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.76■□□□□ 0.27
USB1Q9BQ65 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
USB1Q9BQ65 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.76■□□□□ 0.27
USB1Q9BQ65 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.76■□□□□ 0.27
USB1Q9BQ65 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.76■□□□□ 0.27
USB1Q9BQ65 TMPOP1-202ENST00000424642 1267 ntBASIC16.76■□□□□ 0.27
USB1Q9BQ65 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.76■□□□□ 0.27
USB1Q9BQ65 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 AL353719.1-201ENST00000566847 864 ntBASIC16.76■□□□□ 0.27
USB1Q9BQ65 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.76■□□□□ 0.27
USB1Q9BQ65 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.76■□□□□ 0.27
USB1Q9BQ65 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.76■□□□□ 0.27
USB1Q9BQ65 AC104581.1-202ENST00000635932 2618 ntBASIC16.76■□□□□ 0.27
USB1Q9BQ65 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.76■□□□□ 0.27
USB1Q9BQ65 ZNF815P-204ENST00000434898 1737 ntBASIC16.76■□□□□ 0.27
USB1Q9BQ65 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
USB1Q9BQ65 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.75■□□□□ 0.27
USB1Q9BQ65 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.75■□□□□ 0.27
USB1Q9BQ65 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms