Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.33■■□□□ 1.01
ARID3AQ99856 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
ARID3AQ99856 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
ARID3AQ99856 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
ARID3AQ99856 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ARID3AQ99856 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.33■■□□□ 1.01
ARID3AQ99856 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ARID3AQ99856 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.33■■□□□ 1.01
ARID3AQ99856 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ARID3AQ99856 KRT18P6-201ENST00000555540 1265 ntBASIC21.33■■□□□ 1.01
ARID3AQ99856 SOX15-203ENST00000570788 1093 ntBASIC21.33■■□□□ 1.01
ARID3AQ99856 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ARID3AQ99856 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.33■■□□□ 1.01
ARID3AQ99856 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ARID3AQ99856 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC21.33■■□□□ 1
ARID3AQ99856 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ARID3AQ99856 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.33■■□□□ 1
ARID3AQ99856 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.33■■□□□ 1
ARID3AQ99856 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ARID3AQ99856 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ARID3AQ99856 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ARID3AQ99856 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC21.33■■□□□ 1
ARID3AQ99856 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.33■■□□□ 1
ARID3AQ99856 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.33■■□□□ 1
ARID3AQ99856 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
ARID3AQ99856 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ARID3AQ99856 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.32■■□□□ 1
ARID3AQ99856 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ARID3AQ99856 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.32■■□□□ 1
ARID3AQ99856 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ARID3AQ99856 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ARID3AQ99856 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
ARID3AQ99856 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ARID3AQ99856 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.32■■□□□ 1
ARID3AQ99856 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ARID3AQ99856 AL390719.1-204ENST00000412397 1219 ntBASIC21.32■■□□□ 1
ARID3AQ99856 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.32■■□□□ 1
ARID3AQ99856 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ARID3AQ99856 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ARID3AQ99856 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ARID3AQ99856 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.32■■□□□ 1
ARID3AQ99856 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC21.32■■□□□ 1
ARID3AQ99856 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ARID3AQ99856 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ARID3AQ99856 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.32■■□□□ 1
ARID3AQ99856 AC135050.7-201ENST00000624508 2218 ntBASIC21.32■■□□□ 1
ARID3AQ99856 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ARID3AQ99856 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
ARID3AQ99856 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ARID3AQ99856 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ARID3AQ99856 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
ARID3AQ99856 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.31■■□□□ 1
ARID3AQ99856 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.31■■□□□ 1
ARID3AQ99856 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.31■■□□□ 1
ARID3AQ99856 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
ARID3AQ99856 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ARID3AQ99856 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.31■■□□□ 1
ARID3AQ99856 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.31■■□□□ 1
ARID3AQ99856 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.31■■□□□ 1
ARID3AQ99856 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.31■■□□□ 1
ARID3AQ99856 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ARID3AQ99856 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.31■■□□□ 1
ARID3AQ99856 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.31■■□□□ 1
ARID3AQ99856 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.31■■□□□ 1
ARID3AQ99856 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.3■■□□□ 1
ARID3AQ99856 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
ARID3AQ99856 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ARID3AQ99856 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ARID3AQ99856 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ARID3AQ99856 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC21.3■■□□□ 1
ARID3AQ99856 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ARID3AQ99856 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ARID3AQ99856 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ARID3AQ99856 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.3■■□□□ 1
ARID3AQ99856 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ARID3AQ99856 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ARID3AQ99856 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.3■■□□□ 1
ARID3AQ99856 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.3■■□□□ 1
ARID3AQ99856 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.3■■□□□ 1
ARID3AQ99856 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.3■■□□□ 1
ARID3AQ99856 UNC93B5-201ENST00000530315 699 ntBASIC21.3■■□□□ 1
ARID3AQ99856 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.3■■□□□ 1
ARID3AQ99856 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ARID3AQ99856 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ARID3AQ99856 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ARID3AQ99856 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms