Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS1Q99742 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS1Q99742 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS1Q99742 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.14■□□□□ 0.33
NPAS1Q99742 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS1Q99742 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.13■□□□□ 0.33
NPAS1Q99742 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.13■□□□□ 0.33
NPAS1Q99742 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NPAS1Q99742 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NPAS1Q99742 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAS1Q99742 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NPAS1Q99742 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 AC211429.1-201ENST00000415277 523 ntBASIC17.13■□□□□ 0.33
NPAS1Q99742 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 NAPSB-206ENST00000562112 1266 ntBASIC17.13■□□□□ 0.33
NPAS1Q99742 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NPAS1Q99742 MIR4674-201ENST00000582457 87 ntBASIC17.13■□□□□ 0.33
NPAS1Q99742 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.13■□□□□ 0.33
NPAS1Q99742 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NPAS1Q99742 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NPAS1Q99742 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.13■□□□□ 0.33
NPAS1Q99742 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.13■□□□□ 0.33
NPAS1Q99742 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPAS1Q99742 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NPAS1Q99742 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.12■□□□□ 0.33
NPAS1Q99742 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NPAS1Q99742 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS1Q99742 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.12■□□□□ 0.33
NPAS1Q99742 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS1Q99742 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NPAS1Q99742 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS1Q99742 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
NPAS1Q99742 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPAS1Q99742 ECEL1P2-202ENST00000465689 757 ntBASIC17.12■□□□□ 0.33
NPAS1Q99742 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS1Q99742 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.12■□□□□ 0.33
NPAS1Q99742 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NPAS1Q99742 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
NPAS1Q99742 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS1Q99742 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.12■□□□□ 0.33
NPAS1Q99742 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NPAS1Q99742 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS1Q99742 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS1Q99742 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
NPAS1Q99742 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS1Q99742 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
NPAS1Q99742 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS1Q99742 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NPAS1Q99742 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS1Q99742 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
NPAS1Q99742 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
NPAS1Q99742 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS1Q99742 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS1Q99742 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS1Q99742 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
NPAS1Q99742 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS1Q99742 TSPY14P-201ENST00000303979 915 ntBASIC17.11■□□□□ 0.33
NPAS1Q99742 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS1Q99742 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS1Q99742 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.11■□□□□ 0.33
NPAS1Q99742 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.11■□□□□ 0.33
NPAS1Q99742 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.11■□□□□ 0.33
NPAS1Q99742 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.11■□□□□ 0.33
NPAS1Q99742 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.11■□□□□ 0.33
NPAS1Q99742 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.11■□□□□ 0.33
NPAS1Q99742 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS1Q99742 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.11■□□□□ 0.33
NPAS1Q99742 AC012306.2-201ENST00000609350 630 ntBASIC17.11■□□□□ 0.33
NPAS1Q99742 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.11■□□□□ 0.33
NPAS1Q99742 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS1Q99742 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPAS1Q99742 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NPAS1Q99742 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS1Q99742 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.11■□□□□ 0.33
NPAS1Q99742 KRT8P3-201ENST00000519669 1449 ntBASIC17.11■□□□□ 0.33
NPAS1Q99742 AC092338.2-201ENST00000568827 1415 ntBASIC17.11■□□□□ 0.33
NPAS1Q99742 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.11■□□□□ 0.33
NPAS1Q99742 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS1Q99742 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NPAS1Q99742 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS1Q99742 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NPAS1Q99742 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.1■□□□□ 0.33
NPAS1Q99742 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms