Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 NIFKP9-201ENST00000419265 221 ntBASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.33■□□□□ 0.2
HIST1H2AAQ96QV6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 TSPY20P-201ENST00000450910 630 ntBASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 AL353708.3-201ENST00000610272 989 ntBASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 ITM2C-210ENST00000620962 501 ntBASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST1H2AAQ96QV6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 LETM1P2-201ENST00000597330 2178 ntBASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST1H2AAQ96QV6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H2AAQ96QV6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H2AAQ96QV6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H2AAQ96QV6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H2AAQ96QV6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST1H2AAQ96QV6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms