Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CASD1Q96PB1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CASD1Q96PB1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CASD1Q96PB1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.08■□□□□ 0.81
CASD1Q96PB1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.08■□□□□ 0.81
CASD1Q96PB1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.08■□□□□ 0.81
CASD1Q96PB1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.08■□□□□ 0.81
CASD1Q96PB1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CASD1Q96PB1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.08■□□□□ 0.81
CASD1Q96PB1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.08■□□□□ 0.81
CASD1Q96PB1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CASD1Q96PB1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CASD1Q96PB1 PCDHAC2-203ENST00000615316 3011 ntBASIC20.08■□□□□ 0.8
CASD1Q96PB1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.08■□□□□ 0.8
CASD1Q96PB1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CASD1Q96PB1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CASD1Q96PB1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.08■□□□□ 0.8
CASD1Q96PB1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CASD1Q96PB1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CASD1Q96PB1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.08■□□□□ 0.8
CASD1Q96PB1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.08■□□□□ 0.8
CASD1Q96PB1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.08■□□□□ 0.8
CASD1Q96PB1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CASD1Q96PB1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 AC006333.2-201ENST00000607957 2099 ntBASIC20.07■□□□□ 0.8
CASD1Q96PB1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 AC034236.2-201ENST00000606662 1610 ntBASIC20.07■□□□□ 0.8
CASD1Q96PB1 Z83836.1-201ENST00000624605 1642 ntBASIC20.07■□□□□ 0.8
CASD1Q96PB1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASD1Q96PB1 PVRIG2P-201ENST00000435460 978 ntBASIC20.07■□□□□ 0.8
CASD1Q96PB1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CASD1Q96PB1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CASD1Q96PB1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CASD1Q96PB1 PKD1P6-201ENST00000343738 4769 ntBASIC20.07■□□□□ 0.8
CASD1Q96PB1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CASD1Q96PB1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CASD1Q96PB1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CASD1Q96PB1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.06■□□□□ 0.8
CASD1Q96PB1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASD1Q96PB1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CASD1Q96PB1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CASD1Q96PB1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASD1Q96PB1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.06■□□□□ 0.8
CASD1Q96PB1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASD1Q96PB1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CASD1Q96PB1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.06■□□□□ 0.8
CASD1Q96PB1 AC005332.3-201ENST00000589904 676 ntBASIC20.06■□□□□ 0.8
CASD1Q96PB1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.06■□□□□ 0.8
CASD1Q96PB1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASD1Q96PB1 FP475955.4-201ENST00000623131 1990 ntBASIC20.06■□□□□ 0.8
CASD1Q96PB1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CASD1Q96PB1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CASD1Q96PB1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.05■□□□□ 0.8
CASD1Q96PB1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.05■□□□□ 0.8
CASD1Q96PB1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASD1Q96PB1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASD1Q96PB1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASD1Q96PB1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.05■□□□□ 0.8
CASD1Q96PB1 AC141586.3-201ENST00000562166 1838 ntBASIC20.05■□□□□ 0.8
CASD1Q96PB1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CASD1Q96PB1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CASD1Q96PB1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CASD1Q96PB1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.05■□□□□ 0.8
CASD1Q96PB1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.05■□□□□ 0.8
CASD1Q96PB1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASD1Q96PB1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.05■□□□□ 0.8
CASD1Q96PB1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.05■□□□□ 0.8
CASD1Q96PB1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASD1Q96PB1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASD1Q96PB1 LINC00265-3P-201ENST00000447588 903 ntBASIC20.05■□□□□ 0.8
CASD1Q96PB1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.05■□□□□ 0.8
CASD1Q96PB1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.05■□□□□ 0.8
CASD1Q96PB1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.05■□□□□ 0.8
CASD1Q96PB1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.05■□□□□ 0.8
CASD1Q96PB1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CASD1Q96PB1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASD1Q96PB1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CASD1Q96PB1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASD1Q96PB1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CASD1Q96PB1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASD1Q96PB1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASD1Q96PB1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASD1Q96PB1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CASD1Q96PB1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CASD1Q96PB1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.04■□□□□ 0.8
CASD1Q96PB1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CASD1Q96PB1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms