Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 KRT17P6-201ENST00000453795 1220 ntBASIC19.98■□□□□ 0.79
ZNF558Q96NG5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF558Q96NG5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 TOB2P1-201ENST00000469761 992 ntBASIC19.97■□□□□ 0.79
ZNF558Q96NG5 AP003733.1-201ENST00000491725 852 ntBASIC19.97■□□□□ 0.79
ZNF558Q96NG5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 KRT8P32-201ENST00000512863 1461 ntBASIC19.97■□□□□ 0.79
ZNF558Q96NG5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF558Q96NG5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 TSPY19P-201ENST00000418461 509 ntBASIC19.96■□□□□ 0.79
ZNF558Q96NG5 PVRIG2P-201ENST00000435460 978 ntBASIC19.96■□□□□ 0.79
ZNF558Q96NG5 TSPY18P-201ENST00000441642 509 ntBASIC19.96■□□□□ 0.79
ZNF558Q96NG5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 AC012615.1-201ENST00000565797 1299 ntBASIC19.96■□□□□ 0.79
ZNF558Q96NG5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 AL121772.3-201ENST00000610840 674 ntBASIC19.96■□□□□ 0.79
ZNF558Q96NG5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 FEM1AP3-201ENST00000403722 1741 ntBASIC19.96■□□□□ 0.79
ZNF558Q96NG5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF558Q96NG5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 KRT8P10-201ENST00000450021 1447 ntBASIC19.95■□□□□ 0.78
ZNF558Q96NG5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 AC090616.6-201ENST00000582640 721 ntBASIC19.95■□□□□ 0.78
ZNF558Q96NG5 AC005332.3-201ENST00000589904 676 ntBASIC19.95■□□□□ 0.78
ZNF558Q96NG5 AL732292.2-201ENST00000609649 430 ntBASIC19.95■□□□□ 0.78
ZNF558Q96NG5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
ZNF558Q96NG5 AC034236.2-201ENST00000606662 1610 ntBASIC19.94■□□□□ 0.78
ZNF558Q96NG5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF558Q96NG5 AC091304.2-201ENST00000564639 760 ntBASIC19.94■□□□□ 0.78
ZNF558Q96NG5 MIR3180-4-201ENST00000582223 153 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms