Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.12■□□□□ 0.01
RITA1Q96K30 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.12■□□□□ 0.01
RITA1Q96K30 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RITA1Q96K30 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RITA1Q96K30 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RITA1Q96K30 KRT8P32-201ENST00000512863 1461 ntBASIC15.12■□□□□ 0.01
RITA1Q96K30 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RITA1Q96K30 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RITA1Q96K30 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.12■□□□□ 0.01
RITA1Q96K30 HEIH-201ENST00000623091 1652 ntBASIC15.12■□□□□ 0.01
RITA1Q96K30 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.12■□□□□ 0.01
RITA1Q96K30 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.12■□□□□ 0.01
RITA1Q96K30 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RITA1Q96K30 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RITA1Q96K30 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RITA1Q96K30 WIZP1-201ENST00000531444 2299 ntBASIC15.12■□□□□ 0.01
RITA1Q96K30 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.11■□□□□ 0.01
RITA1Q96K30 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RITA1Q96K30 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.11■□□□□ 0.01
RITA1Q96K30 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.11■□□□□ 0.01
RITA1Q96K30 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.11■□□□□ 0.01
RITA1Q96K30 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RITA1Q96K30 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RITA1Q96K30 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.11■□□□□ 0.01
RITA1Q96K30 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RITA1Q96K30 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RITA1Q96K30 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.11■□□□□ 0.01
RITA1Q96K30 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.11■□□□□ 0.01
RITA1Q96K30 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RITA1Q96K30 UNC93B2-201ENST00000285383 730 ntBASIC15.11■□□□□ 0.01
RITA1Q96K30 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RITA1Q96K30 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RITA1Q96K30 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RITA1Q96K30 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.11■□□□□ 0.01
RITA1Q96K30 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.11■□□□□ 0.01
RITA1Q96K30 AC068587.9-201ENST00000641814 219 ntBASIC15.11■□□□□ 0.01
RITA1Q96K30 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RITA1Q96K30 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RITA1Q96K30 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.11■□□□□ 0.01
RITA1Q96K30 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RITA1Q96K30 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RITA1Q96K30 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.11■□□□□ 0.01
RITA1Q96K30 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RITA1Q96K30 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RITA1Q96K30 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RITA1Q96K30 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
RITA1Q96K30 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RITA1Q96K30 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RITA1Q96K30 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.11■□□□□ 0.01
RITA1Q96K30 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RITA1Q96K30 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.1■□□□□ 0.01
RITA1Q96K30 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.1■□□□□ 0.01
RITA1Q96K30 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 AL499627.1-201ENST00000569373 2188 ntBASIC15.1■□□□□ 0.01
RITA1Q96K30 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.1■□□□□ 0.01
RITA1Q96K30 ANO7L1-203ENST00000602586 1720 ntBASIC15.1■□□□□ 0.01
RITA1Q96K30 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.1■□□□□ 0.01
RITA1Q96K30 MIR1238-201ENST00000408483 83 ntBASIC15.1■□□□□ 0.01
RITA1Q96K30 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.1■□□□□ 0.01
RITA1Q96K30 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.1■□□□□ 0.01
RITA1Q96K30 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.1■□□□□ 0.01
RITA1Q96K30 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
RITA1Q96K30 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 MTMR9LP-203ENST00000426597 1545 ntBASIC15.1■□□□□ 0.01
RITA1Q96K30 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RITA1Q96K30 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.1■□□□□ 0.01
RITA1Q96K30 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.1■□□□□ 0.01
RITA1Q96K30 KRT17P2-201ENST00000300992 1314 ntBASIC15.1■□□□□ 0.01
RITA1Q96K30 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RITA1Q96K30 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RITA1Q96K30 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.1■□□□□ 0.01
RITA1Q96K30 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
RITA1Q96K30 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RITA1Q96K30 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RITA1Q96K30 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.09■□□□□ 0.01
RITA1Q96K30 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.09■□□□□ 0.01
RITA1Q96K30 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RITA1Q96K30 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RITA1Q96K30 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RITA1Q96K30 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.09■□□□□ 0.01
RITA1Q96K30 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.09■□□□□ 0.01
RITA1Q96K30 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RITA1Q96K30 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.09■□□□□ 0.01
RITA1Q96K30 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RITA1Q96K30 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms