Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHDQ96IW2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.99■□□□□ 0.63
SHDQ96IW2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.99■□□□□ 0.63
SHDQ96IW2 IGHGP-201ENST00000390555 1178 ntBASIC18.99■□□□□ 0.63
SHDQ96IW2 TSPY12P-201ENST00000421279 868 ntBASIC18.99■□□□□ 0.63
SHDQ96IW2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHDQ96IW2 AC093909.1-201ENST00000504731 1122 ntBASIC18.99■□□□□ 0.63
SHDQ96IW2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.99■□□□□ 0.63
SHDQ96IW2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHDQ96IW2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.99■□□□□ 0.63
SHDQ96IW2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.99■□□□□ 0.63
SHDQ96IW2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHDQ96IW2 NSUN5P1-202ENST00000421140 1535 ntBASIC18.99■□□□□ 0.63
SHDQ96IW2 NSUN5P2-203ENST00000457352 1529 ntBASIC18.99■□□□□ 0.63
SHDQ96IW2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHDQ96IW2 IL9RP2-201ENST00000423948 1312 ntBASIC18.99■□□□□ 0.63
SHDQ96IW2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHDQ96IW2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHDQ96IW2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHDQ96IW2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHDQ96IW2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHDQ96IW2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHDQ96IW2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHDQ96IW2 AL512408.1-201ENST00000569378 2000 ntBASIC18.98■□□□□ 0.63
SHDQ96IW2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SHDQ96IW2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHDQ96IW2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHDQ96IW2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHDQ96IW2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SHDQ96IW2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHDQ96IW2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHDQ96IW2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.98■□□□□ 0.63
SHDQ96IW2 NUS1P2-201ENST00000417358 873 ntBASIC18.98■□□□□ 0.63
SHDQ96IW2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SHDQ96IW2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SHDQ96IW2 MINOS1P3-201ENST00000457048 203 ntBASIC18.98■□□□□ 0.63
SHDQ96IW2 KRT18P58-201ENST00000527480 1120 ntBASIC18.98■□□□□ 0.63
SHDQ96IW2 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.98■□□□□ 0.63
SHDQ96IW2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.98■□□□□ 0.63
SHDQ96IW2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SHDQ96IW2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.98■□□□□ 0.63
SHDQ96IW2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.98■□□□□ 0.63
SHDQ96IW2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SHDQ96IW2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
SHDQ96IW2 RCC2P3-201ENST00000418112 1537 ntBASIC18.98■□□□□ 0.63
SHDQ96IW2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.98■□□□□ 0.63
SHDQ96IW2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHDQ96IW2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHDQ96IW2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHDQ96IW2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHDQ96IW2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SHDQ96IW2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SHDQ96IW2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHDQ96IW2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHDQ96IW2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.97■□□□□ 0.63
SHDQ96IW2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.97■□□□□ 0.63
SHDQ96IW2 POM121L3P-201ENST00000419331 1163 ntBASIC18.97■□□□□ 0.63
SHDQ96IW2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHDQ96IW2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.97■□□□□ 0.63
SHDQ96IW2 AF238378.1-201ENST00000526806 358 ntBASIC18.97■□□□□ 0.63
SHDQ96IW2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.97■□□□□ 0.63
SHDQ96IW2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.97■□□□□ 0.63
SHDQ96IW2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SHDQ96IW2 AC024563.2-201ENST00000603282 481 ntBASIC18.97■□□□□ 0.63
SHDQ96IW2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.97■□□□□ 0.63
SHDQ96IW2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHDQ96IW2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SHDQ96IW2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SHDQ96IW2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SHDQ96IW2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SHDQ96IW2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.97■□□□□ 0.63
SHDQ96IW2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHDQ96IW2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.97■□□□□ 0.63
SHDQ96IW2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
SHDQ96IW2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHDQ96IW2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHDQ96IW2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHDQ96IW2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHDQ96IW2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SHDQ96IW2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHDQ96IW2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHDQ96IW2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHDQ96IW2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHDQ96IW2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHDQ96IW2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.96■□□□□ 0.63
SHDQ96IW2 FAM197Y8-203ENST00000450145 560 ntBASIC18.96■□□□□ 0.63
SHDQ96IW2 AF186996.4-201ENST00000467186 377 ntBASIC18.96■□□□□ 0.63
SHDQ96IW2 RN7SL606P-201ENST00000472779 293 ntBASIC18.96■□□□□ 0.63
SHDQ96IW2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.96■□□□□ 0.63
SHDQ96IW2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHDQ96IW2 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.96■□□□□ 0.63
SHDQ96IW2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.96■□□□□ 0.63
SHDQ96IW2 AC011840.4-201ENST00000578471 627 ntBASIC18.96■□□□□ 0.63
SHDQ96IW2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SHDQ96IW2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.96■□□□□ 0.63
SHDQ96IW2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.96■□□□□ 0.63
SHDQ96IW2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHDQ96IW2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHDQ96IW2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SHDQ96IW2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms